Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0015 ATGGATATAACTTGTAGCCTGCCGCAGTCAAGAATATTAGAAGGAGGACGTTACAAACAAAAGTATAATCTCGGTTCTTGCATGACATTCAGAAGATGTATTGGTTGTGCCTTCCTTGGCAACTCGAATACTATCGTGAAAGCGCGGTTTAGTGGGATAAACAAAACTAGTAGTACTGCTTTTCCCAATGCTAGATTGGTTTCCGTGGGAGAGTTCAAAGTTTCAAATATGAAGAGAACTTGGTCTATTAAGAAAAGTGATATTCTTACGAGATCCAAAGCAATTTGGGTAAAGTGTCAGGGTAATGATTCTTTGGCTTATGTTAATGGTAATGGTCGTAATGTAGATTACGCGAAAGGTTCTGGTGAGGAATTGGGATTAGAGTCTACTTCTAGTGCTGAACTGACTGTATCAGTGGAAGGGGAAGAAGGGGGACACGAAGTCGTCGAAGAAGACACGCACAATGCGGATGAACTGAAAGAATTATTGCAAAAGGCCTTGATGGACTTAGAAGTTGCAAGAGTAAATAGTGCCATGTTCGAGGAGAAGGTTAAAAAAATTTCAGAGACTGCAATATCTTTGCAGGATGAAGCATCAAATGCTTTGAACAATGTTAATTCTACTCTTGGTGTTATCCAAGAGATTGAGACTGAAGAATGTATGGCGAAGGAAGCCGTTCAAAAAGCAACGATGGCTCTTTCCTTGGCTGAGGCGAGGCTACAAGTGGCCATAGAATCTATGGAGGTTGCAAAACAAGAGCATGATTCTCCGCGAGGTTCTAATGAGAGTGTTGAGGACGATGACATAATAGAGGAGGAGAAAGCACTTTTGGCTGCTCAGGAAGATGTCAACGAATGCCAGGCAAATTTAGCAAATTGTGAAGCAGCACTGAGACACTGGCACAATAGAAAGGGGGAATTGCAGAAGGAAGTGGAGAAGTTGAACGGACTCTCTGAAAAGGCACAGCTGAATGCATCAAAAGCAGAGGAGGATGTCACAAATATAATGCTTTTAGCAGAGCAAGCTGTTGCCTTTGAACTTGAGGCTACTCAGCGAGTAAATGATGCTGAGATTGCCTTACAGCGAGCAGAAAAATCCATTTCGAGTCCTAATGTTGATACCACAGAAACTATCCAAATACAAGATTCTGAGGGTGTTTCTGAGGATGAGAAAGCAGTTCAAGACTTCTCTGGGGAGTTCATTACTGAAGGGGATGTAGATCTGCCAATTGATGATGAATCCTTGCTTCAGAAGCGATCACCTGAAACACTAACTGATAAAAGTAGCCAAAGTTTGGGGGAGTCAGCTCACTCTGATTATCTGAGTGATCATGAGAATGGACAGTTAAACTTAGACTCTTTTGTGGAAGCTGAAGCAGAAGTAGAGAAATTGAAGAATGCTGTTCAGACAAAAAAACAGGAGACACAGAAAGATTTTACTAGAGATAGCTCACCCTTTGCTCCCAAAGGATTATTGAAGAAGTCATCCCGTTTCTTTTCTGCATCATTCTTCTCTTTCTCAGAAGATGGAACCGAGTTCACTCCAGCATCATTTTTCCAAGGTTTTGTGGAATCTGTACAGAAGCAGTTACCTAAGGTGGTTCTTGGGTTATTGTTAATGGGAGCAGGGGTTGCCTTTTATGCCAATCGAGGAGAGAGGAGCTCTCAGCTCTTTCAACAGCCAGAAGTCATTGCAAGCAGTGTCGAAGAAGTTTCCTCAAGTACAAAGCCTCTGGTCAGACAACTTCGGAAACTTCCCAAGAGAATCAAGAAAATTATTGCATCATTACCTCAACAAGAGGTGAATGAGGAGGAAGCTTCTCTCTTTGACATGCTTTGGTTATTGTTGGCAAGTGTTATATTTGTGCCTATATTTCAAAAAATTCCTGGAGGGAGTCCTGTTCTTGGCTACTTGGCTGCTGGTATCTTGATTGGGCCTTATGGTCTCTCCATTATCCGTCACGTTCATGGGACAAAAGCAATAGCTGAATTTGGAGTTGTTTTCTTATTATTCAATATCGGCCTGGAGCTCTCTGTTGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCTGCTCAGGTCTTGTTGACTGCTGTAGCAGTTGGTTTGGTGGCTCATTATGTTTGTGGTCTAGCTGGCCCTGCTTCAATTGTTATTGGGAATGGTCTGGCGTTATCATCCACTGCTGTTGTTCTGCAAGTTTTGCAGGAGAGAGGGGAGAGCACATCACGGCATGGTCGAGCTACTTTTTCTGTTTTACTTTTTCAGGATTTGGCTGTTGTGGTCTTGCTAATACTCATCCCCCTTATTTCACCAAATTCTTCCAAAGGAGGGGTTGGTTTCCAAGCTATTGCTGAAGCTCTTGGACTGGCTGCTGTTAAGGCAGCAGTTGCCATCACTGCCATAATTGCTGGTGGACGATTGCTCCTTCGACCAATATATAGGCAGATTGCTGAAAATCAGAATGCAGAAATATTTTCAGCGAATACACTCCTTGTTATTCTTGGGACTAGTCTTCTTACTGCTAGGGCAGGACTTTCCATGGCCCTTGGGGCATTTCTGGCTGGTTTACTTCTTGCAGAAACTGAATTTTCCTTACAGGTTGAATCTGATATTGCTCCATATCGTGGTCTTCTATTGGGGCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTCCTTGTGTCAAACTTTCCAGTCGTCACAGGGACACTTGGACTCTTAATTTTTGGCAAGACTATATTGGTTTCTTTGATTGGAAAAAGCTTTGGGATTTCACTCATTTCTGCCATTAGAGTTGGTCTCCTTCTTGCTCCTGGAGGGGAATTTGCCTTTGTGGCTTTTGGCGAAGCTGTTAATCAGGGCATAATGTCTTCCCAACTTTCATCTTTGCTATTTCTTGTTGTGGGAATCTCTATGGCTCTCACACCATGGTTAGCTGCAGGCGGCCAGCTTATTGCTTCCCGTTTTGAGCTGCATGATGTTCGAAGCTTATTACCTGTAGAAAGTGAGACAGATGATTTACAAGATCACATCATTATTTGTGGATTTGGACGAGTTGGCCAGATCATTGCTCAACTTCTTTCTGAGCGACTGATCCCTTTTGTCGCTCTAGATGTGAGAAGTGATAGAGTGGCAGTTGGTCGTGCTCTGGATCTCCCTGTATACTTTGGAGATGCTGGTAGTCGTGAGGTCCTACACAAGATTGGGGCTGAAAGAGCATGTGCTGCAGCAGTAACTCTAGATTCTCCTGGTGCAAATTATCGAACAGTTTGGGCTCTGAGCAAGTACTTCCCAAATGTGAAGACTTTTGTTCGAGCTCATGATGTTGATCATGGCCTGAATTTAGAAAAGGCTGGAGCTACTGCTGTTGTACCAGAGACCCTGGAACCGAGTCTTCAACTAGCAGCTGCTGTACTTGCTCAGGCTAAACTTCCCACGTCAGAGATTGCATCAGCTATAAATGAATTCAGATCCCGGCATCTGGCTGAGCTTACTGAGCTGTGTGAAACAAGTGGCAGTTCTCTTGGTTATGGATTTAACCGAAGCGCGAGCAAATCCAAATCTCAATCCTCAGATTCATTGGATGATAACCAAATCTCTGAAGGGACACTGGCAATATGA 3639 0.4314 MDITCSLPQSRILEGGRYKQKYNLGSCMTFRRCIGCAFLGNSNTIVKARFSGINKTSSTAFPNARLVSVGEFKVSNMKRTWSIKKSDILTRSKAIWVKCQGNDSLAYVNGNGRNVDYAKGSGEELGLESTSSAELTVSVEGEEGGHEVVEEDTHNADELKELLQKALMDLEVARVNSAMFEEKVKKISETAISLQDEASNALNNVNSTLGVIQEIETEECMAKEAVQKATMALSLAEARLQVAIESMEVAKQEHDSPRGSNESVEDDDIIEEEKALLAAQEDVNECQANLANCEAALRHWHNRKGELQKEVEKLNGLSEKAQLNASKAEEDVTNIMLLAEQAVAFELEATQRVNDAEIALQRAEKSISSPNVDTTETIQIQDSEGVSEDEKAVQDFSGEFITEGDVDLPIDDESLLQKRSPETLTDKSSQSLGESAHSDYLSDHENGQLNLDSFVEAEAEVEKLKNAVQTKKQETQKDFTRDSSPFAPKGLLKKSSRFFSASFFSFSEDGTEFTPASFFQGFVESVQKQLPKVVLGLLLMGAGVAFYANRGERSSQLFQQPEVIASSVEEVSSSTKPLVRQLRKLPKRIKKIIASLPQQEVNEEEASLFDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLLTAVAVGLVAHYVCGLAGPASIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYRQIAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPVVTGTLGLLIFGKTILVSLIGKSFGISLISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPWLAAGGQLIASRFELHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKIGAERACAAAVTLDSPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIASAINEFRSRHLAELTELCETSGSSLGYGFNRSASKSKSQSSDSLDDNQISEGTLAI 1212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0015 1212 Pfam TrkA-N domain 1017 1130 IPR003148 GO:0006813
Lele38g0015 1212 MobiDBLite consensus disorder prediction 1189 1212 - -
Lele38g0015 1212 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 190 1203 - -
Lele38g0015 1212 FunFam K(+) efflux antiporter 2 chloroplastic 604 990 - -
Lele38g0015 1212 Coils Coil 149 176 - -
Lele38g0015 1212 Gene3D - 604 990 IPR038770 -
Lele38g0015 1212 MobiDBLite consensus disorder prediction 416 443 - -
Lele38g0015 1212 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1013 1154 IPR036291 -
Lele38g0015 1212 Coils Coil 346 366 - -
Lele38g0015 1212 Coils Coil 454 474 - -
Lele38g0015 1212 MobiDBLite consensus disorder prediction 421 443 - -
Lele38g0015 1212 Coils Coil 233 253 - -
Lele38g0015 1212 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 615 895 IPR004771 GO:0006812|GO:0008324|GO:0016020
Lele38g0015 1212 Coils Coil 269 331 - -
Lele38g0015 1212 ProSiteProfiles RCK N-terminal domain profile. 1016 1138 IPR003148 GO:0006813
Lele38g0015 1212 Gene3D - 1012 1176 - -
Lele38g0015 1212 FunFam K(+) efflux antiporter 2 chloroplastic 1012 1176 - -
Lele38g0015 1212 Pfam Sodium/hydrogen exchanger family 614 984 IPR006153 GO:0006812|GO:0015299|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0015 Lele-ChrLele38 98995 117634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0015 99 1212 Inorganic Solute Cotransporters AT4G00630 71.278 0.0 1442