Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0006 ATGGAAGGCAGAAGACTCCGGATCCAGAAAAGAAATGGGAGAAACATGACCAAAACTCAGAAAAGGGGACCATGCTCTCAGAGAATGGAAGGCTATCTAGTTCTTTATCTGAATGTAGAGATAAAAGTCGAGGGCTTTTTACCTAGAGGGCAGTTTACCACAAACGCAGAGAGAGTTAAGGTTAATCAAGAAAGTGATGGTAAAGTACCTGGGGAAACACATTCTATTGGGAGAGGCAGGACGTATCGGAAGCATAATGTGGATGCATCAAAAGAAGCTACTGTAGATGCACCCAATGCATCTGTGTTAAAAGGCAACAATTATCATCAGCTTCCTAAGGAGTTGCATGAAATGAAAATTAGAGATGTAAAAGGCAACAATTCCGATGAAAAGGATATAGAGGCAACTGTCGTCAGTGGTAATGGAACAGAAGTTGGTCAGATGATTACTACTGCCATTGGTGGTAAAGACGGACAACCAAAGCAGGCCCAGTGTGTTGAGACTGGTGAAGCAGTTGCCATTAAGAAGAACTATTTCTTTTCAACTACTGATAAAGATGAGTTGTTCCTGAACCTAGTTTTGGAGTATGTACCTGAAACTGTATATAGAGTCTCAAAGCATTATACTAGGATACACCAGCACATGCCTATCATTTATGTACAACTGTATACATACCAAGTTAATTCCGAGACTCATCGGCTAAAGATGTGTGATTTGGGGAGAGCAAAGATGGCTCCAGAACTTATATTTGGGGCAACAGAATACACAACTGCCATTGACATATGGTCTGTTGGTTGTGTTATGGCTGAGTTCGTTCTAGGAAAGCCCCTGTTTCCGGGAGAAAGTGGGGTTGATCCATTGGTTGAAATCATTAAGATCTTGGGCACACCCAAAAGAGAAGAAATGAAGTGCATGGATCCAAATTACAAAGAATTTAAGTTCCCTCCGATCAAAGCACGCCCATGGCACAAGTTGGAAGCATGTACTCACTCCTTCTTTGATGATCTTAGAGACCCAAATACACGTTTACCAAATGGGCAACCACTACCTCCATGGTTCAATTTCACTAATAAAGAACTTGCCAGTGCACCTGCTGAGTTGTGTAATCGTCTTATTCCCAAGCACGTCAGGAATTGA 1137 0.4186 MEGRRLRIQKRNGRNMTKTQKRGPCSQRMEGYLVLYLNVEIKVEGFLPRGQFTTNAERVKVNQESDGKVPGETHSIGRGRTYRKHNVDASKEATVDAPNASVLKGNNYHQLPKELHEMKIRDVKGNNSDEKDIEATVVSGNGTEVGQMITTAIGGKDGQPKQAQCVETGEAVAIKKNYFFSTTDKDELFLNLVLEYVPETVYRVSKHYTRIHQHMPIIYVQLYTYQVNSETHRLKMCDLGRAKMAPELIFGATEYTTAIDIWSVGCVMAEFVLGKPLFPGESGVDPLVEIIKILGTPKREEMKCMDPNYKEFKFPPIKARPWHKLEACTHSFFDDLRDPNTRLPNGQPLPPWFNFTNKELASAPAELCNRLIPKHVRN 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0006 378 MobiDBLite consensus disorder prediction 1 24 - -
Lele38g0006 378 Gene3D Transferase(Phosphotransferase) domain 1 199 377 - -
Lele38g0006 378 SUPERFAMILY Protein kinase-like (PK-like) 155 338 IPR011009 -
Lele38g0006 378 SMART serkin_6 146 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0006 378 Pfam Protein kinase domain 244 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0006 378 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 176 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0006 Lele-ChrLele38 41382 50897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0006 227 318 Core Cell Cycle Gene Families AT3G48750 36.607 3.15e-17 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Lele38g0006 Pkinase 4.1e-11 CL0016