Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1417 ATGCCTAGCCTTTTCCATCATGTCCCTTTGACGAGGTCTAGAACCTTCTTTCGCTGGGTATCACGTCTTGGACCGGGGCACAAGCATCCACGCTCCAAGGTCGTCTTCTTCTGGCTTTCCTATAATCTGCCTTGTACCACCTATTCTTGTTCTGCTCTGACCTCAAGTAGAAAGTTCAAGACTTTTCAGCTCAAGACTGGATTCTGGGAATCAATAAAAACTGGCTTTGCCATCCAAAATTCAAACTGCTCACACATTTTGCCTACAGATTCTGAAAACACTTCCACAATATATATCGGATTGATTCTATGGGAACTAACTCTTCCAGCCTACCAAGCAGCTCATTTGATTATTAGTCAATCTCTAACCATCGACTTTCTTCCTTTTAGATTGTTGAAGAATAACACAACACAAGTCATTGACTCACCTTCAACTGATGAAGAAGATGATGATTCTCTGCCTCAAGAGTTTGTCCTTCTTGAAAAGACCGAACTTGATGGAACAATTGAACGAATTATTTTCTCTTCAGGTGGAGATATCGATGTTTATGATGTTCAAGGCCTTTGTGATAAGGTGGGGTGGCCTCGGAGGCCTTTGTCAAAACTATCTGCTGCTTTGAAGAATAGCTATATGGTGGCCTCACTGCATTCCATCAGAAAGTCACCTGGCTCAGGTTCAGAGGAAAATGGGAAGATGAAACTAATTGGCATGGCCCGTGCAACATCAGACCATGCCTTCAATGCTACAATATGGGATGTCCTCATTGATCCAGCTATCAGTGGACAATTCAAAGGCCAAGGCCTTGGGAAGGCTCTTGTGGAGAAATTGATTCGGGCTCTTCTGCAAAGAGACATCGGAAATATAACTCTATTTGCAGATAGTCAAGATCAGTGTGATGTGACCATTGGTTCAAGCACCTCGGTCATATCACATTTGTCTGTATTTGTATTTGCTACAACGTATAACCCCATAGAATTACATTATTCAGTACACCGCGGCCACCACACCACCAGATCTCTTGGCATAATTAGTGATTGGAATTGGCTTCCACCTTCACAACCTCGGCTCCTTCAAGTTCATACAAGGCTAAGAAGTTGGACTACAAAAGACCAATCCATTGTAACATAA 1128 0.4273 MPSLFHHVPLTRSRTFFRWVSRLGPGHKHPRSKVVFFWLSYNLPCTTYSCSALTSSRKFKTFQLKTGFWESIKTGFAIQNSNCSHILPTDSENTSTIYIGLILWELTLPAYQAAHLIISQSLTIDFLPFRLLKNNTTQVIDSPSTDEEDDDSLPQEFVLLEKTELDGTIERIIFSSGGDIDVYDVQGLCDKVGWPRRPLSKLSAALKNSYMVASLHSIRKSPGSGSEENGKMKLIGMARATSDHAFNATIWDVLIDPAISGQFKGQGLGKALVEKLIRALLQRDIGNITLFADSQDQCDVTIGSSTSVISHLSVFVFATTYNPIELHYSVHRGHHTTRSLGIISDWNWLPPSQPRLLQVHTRLRSWTTKDQSIVT 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1417 375 CDD NAT_SF 227 290 - -
Lele37g1417 375 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 181 294 IPR016181 -
Lele37g1417 375 Pfam Acetyltransferase (GNAT) family 226 290 IPR000182 GO:0016747
Lele37g1417 375 Gene3D - 176 298 - -
Lele37g1417 375 PANTHER ACYL-COA N-ACYLTRANSFERASE 133 295 IPR045039 GO:0008080
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1417 Lele-ChrLele37 22866707 22870526 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele37g1417 Acetyltransf_1 3.7e-06 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0290 42 2464978 2465562 Lele37g1417 37 22866707 22870526 CCT
Lele43g1075 43 19212805 19213392 Lele37g1417 37 22866707 22870526 CCT
Lele44g1059 44 19303179 19303763 Lele37g1417 37 22866707 22870526 CCT
Lele41g0294 41 2406197 2406838 Lele37g1417 37 22866707 22870526 CCT
Lele37g1417 37 22866707 22870526 Lele39g0007 39 69341 72073 hybridization
Lele37g1417 37 22866707 22870526 Lele40g1241 40 22162877 22166820 hybridization