Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1411 ATGCCGTTAAAGCTACCTCCTTCTTCGCCCATTTTAACACTCACAAATATACACTTCCCTCCCTTGTCGGCTCACATCTCTCTTTACCTCTTCTTCCATTTTGTCGTATGCATATTTCCCCTTGGTGCCATTTTTTACGATCTCCATTGTCAGGGGAGGGAGCGGAATTGCTGGGAGAGGTTACTCAGTCTGGTGCACCTTGATATTACCTCTGAACAAGCAAACTCGATCATGTTACAATCCTACTTAGTTAGGATACCTTCTTTTCTACTCCTGGTTTTCTCTTTGCATACTTTGGCCGATCTTAATTCAGAAAAGCAAGCTCTCCTTGACTTTGCTGCTGCAGTTCATCACGGCCAAAAAATTAATTGGAATTCTGATACTTCTATCTGCACTTGTTGGGTGGGAATCACTTGCAGCCCAAATGGCTCGCACGTGCTTGCTCTGCGGCTTCCTGGCATTGGACTGCGTGGCTCTCTCCCTGCCAATACAATTAGTAAGCTACATGGTCTCATGATTCTCAGTCTTCGATCCAACAGCCTGAGCGGAAATATTCCAAATGACGTACTTTCCCATCGTTCCCTCCGCTTTATATATCTTCAATATAACAACTTTTCAGGCGATATCCCTCACTCTCTGTCTCACCAGCTTGAATTTCTTGATCTGTCCTACAACTCTTTCACTGGAAAAATCCCATCCTTAATTCAGAACTTGCCATATCTAACTGGATTAAAACTCCAGAATAACTCTCTCAGCGGACCCATCCCGGATTTAAACCTCCCAAAGCTTAAGATTTTGAATTTGAGCTACAACAATTTGAATGGTTCAATTCCTTCAGCCCTCCAGAAATTTCCTTCCTCCTTATTTCGAGGGAATCTCAAGTTATGTGGACAACCAGTATACCAATGTTCTTCAGTTTCCCCATATTACGCGCTGTCTCCACCAGCGGTCTGGTCAAAACCAAGTGATCTATCCAACAGGAAGCTGAACACAGGTGCTATAATTGCCATTGCCTTCATTGGTTTTACACTGCTGTTTCTTCCGCTTTTGATGGTAGTGTTGTGCTGTCTCAAGAAAAGAGATGGTGGACACAATGCAACGCTTAAAGGCAAGGATAACAAGCTTAAGGAGGACTTTGGGAGTGGAGTGCAAGAACCAGAGAAAAACAAGCTAATATCTTTTGAAGGCTGTTCTTATAGTTTTGATCTTGAGGACCTATTAAGAGCTTCTGCTGAGGTACTTGGGAAGGGAAGCTGCGGGACGACTTACAAAGCCATATTGGAGGAGGGTACGGCAGTGGTTGTGAAGAGGTTAAAAGAAGTAGAGGTAGGGAAAAAAGAATTTGAACAACAAATGGAGACTGTTGAAAGGCTAGGTCATCACCGAAATGTTATTCCTGTCCGTGCTTACTACTACTCCAAGGACCAAAAACTGCTGGTTTATGATTACATAGCAGTTGGAAGCCTTTCCAGGCTATTGCATGGAACCAAGGGAGCTGGGCGAACTCCATTAAGTTGGGAATCCAGACTGAAGATCTCTCTTGGAGCTGCTAGGGGTATTGCCCATATCCACTCAGCTAGCGGAAGGAAATTTGTGCATGGCAATATAAAATCATCTAATGTGCTTGTCACAGTAGATGTTGAAGGCTGCATATCAGATTTTGGCTTAACTCCTCTAATCAGTTTCTCTGTCTCATCTAGAAGTCTAGGGTACCAAGCACCTGAGGCTATTGAAACCCGAAAATCCTCCCAGAAGTCTGATGTATATAGCTTTGGCGTTGTCCTTCTTGAGATGCTAACAGGCAAAACACCAGTCGAGCATTCAGGGAATGACGATGTGGTAGATCTTCCAAAGTGGGTTCAGTCTGTTGTTAGGGAGGAATGGACTGGTGAAGTATTTGATGTAGAGCTGATGAGCTATCCAAATATTGAAGAAGAACCGTTGCAGATGCTGCAGTTGGCAATGGCATGTGTGGCAAGGGAGCCTGGCACAAGACCTTCAATGGAAGAAGTCGTTAAAATAATTGAAGAGATCAGAGCATCCAATTCCGAGTGCACGAATGTATGA 2067 0.4388 MPLKLPPSSPILTLTNIHFPPLSAHISLYLFFHFVVCIFPLGAIFYDLHCQGRERNCWERLLSLVHLDITSEQANSIMLQSYLVRIPSFLLLVFSLHTLADLNSEKQALLDFAAAVHHGQKINWNSDTSICTCWVGITCSPNGSHVLALRLPGIGLRGSLPANTISKLHGLMILSLRSNSLSGNIPNDVLSHRSLRFIYLQYNNFSGDIPHSLSHQLEFLDLSYNSFTGKIPSLIQNLPYLTGLKLQNNSLSGPIPDLNLPKLKILNLSYNNLNGSIPSALQKFPSSLFRGNLKLCGQPVYQCSSVSPYYALSPPAVWSKPSDLSNRKLNTGAIIAIAFIGFTLLFLPLLMVVLCCLKKRDGGHNATLKGKDNKLKEDFGSGVQEPEKNKLISFEGCSYSFDLEDLLRASAEVLGKGSCGTTYKAILEEGTAVVVKRLKEVEVGKKEFEQQMETVERLGHHRNVIPVRAYYYSKDQKLLVYDYIAVGSLSRLLHGTKGAGRTPLSWESRLKISLGAARGIAHIHSASGRKFVHGNIKSSNVLVTVDVEGCISDFGLTPLISFSVSSRSLGYQAPEAIETRKSSQKSDVYSFGVVLLEMLTGKTPVEHSGNDDVVDLPKWVQSVVREEWTGEVFDVELMSYPNIEEEPLQMLQLAMACVAREPGTRPSMEEVVKIIEEIRASNSECTNV 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1411 688 FunFam pollen receptor-like kinase 1 376 483 - -
Lele37g1411 688 CDD STKc_IRAK 414 678 - -
Lele37g1411 688 Pfam Leucine Rich Repeat 262 284 IPR001611 GO:0005515
Lele37g1411 688 Pfam Leucine Rich Repeat 216 238 IPR001611 GO:0005515
Lele37g1411 688 Pfam Protein kinase domain 411 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g1411 688 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 484 687 - -
Lele37g1411 688 FunFam Probable inactive receptor kinase RLK902 102 259 - -
Lele37g1411 688 Coils Coil 438 458 - -
Lele37g1411 688 Pfam Leucine rich repeat N-terminal domain 103 140 IPR013210 -
Lele37g1411 688 ProSiteProfiles Protein kinase domain profile. 408 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g1411 688 PANTHER OS05G0588300 PROTEIN 89 680 - -
Lele37g1411 688 SUPERFAMILY Protein kinase-like (PK-like) 412 675 IPR011009 -
Lele37g1411 688 Gene3D Phosphorylase Kinase; domain 1 376 483 - -
Lele37g1411 688 PRINTS Leucine-rich repeat signature 217 230 - -
Lele37g1411 688 PRINTS Leucine-rich repeat signature 260 273 - -
Lele37g1411 688 Gene3D Ribonuclease Inhibitor 103 216 IPR032675 -
Lele37g1411 688 Gene3D Transferase(Phosphotransferase) domain 1 485 687 - -
Lele37g1411 688 Gene3D Ribonuclease Inhibitor 217 305 IPR032675 -
Lele37g1411 688 SUPERFAMILY L domain-like 119 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1411 Lele-ChrLele37 22841092 22843241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1411 89 686 Receptor kinase-like Gene Family AT5G58300 60.561 0.0 729
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele37g1411 Pkinase 4.8e-35 CL0016