Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1407 ATGGAGAATCTTCCGTCGGATCGTAGAAAGGCAGTCCATGAACTGGAGAGGGGCCGTGAGTTCGCCACCCAGCTTCGCCGGCTCGTTCTCAACTCCAACGGGGAAGGAGATGTCGATGGAACGACGCCGTCTGCCCAAGATCTTGCTGACAAGGTGGTGACCTCCTTTTCCAACACCCTTTTGCTCTTTAATCTGCCCTCTCGCGATTCCCAGATGCAACAATATTCTTCTTGTTTGCTTCCCGCTAAATCCGACGACTCTGAAGATAGTTGCAAGAGCACTTCCGCCTTTAAGGAACGAAGAGGTTCCTATAAGAGAAGGAACTACTTCAGGTGCAGTCACAGGTTTGACCAGGGATGCCAAGCAACCAAACAGGTGCAGAGAATTCAAGAGAAGCCTGAGCTGTACAGGACAACTTACTATGGCGATCACACCTGCAACAGGAACTCGTTGAACAACGAGATCATTTTGGATGCTAAACCTTCCATATTAATCAGTTTTGAAAATAACCTCCCCACCGAACAAGCCTTCTTCTCACCATCCTCCTCCTCATCTCTTCCCATGACCAGAACACAGTCTAAGGAAGAGATTCCCTCATCTTCATCGGAGGGTTACCTTCTCTCCCCTGAATCAGACCATAAGGATCCCATTCCTGATATGTTGTACGGTGATTTCTTTGAGCACTTTGATTTTTGA 696 0.4813 MENLPSDRRKAVHELERGREFATQLRRLVLNSNGEGDVDGTTPSAQDLADKVVTSFSNTLLLFNLPSRDSQMQQYSSCLLPAKSDDSEDSCKSTSAFKERRGSYKRRNYFRCSHRFDQGCQATKQVQRIQEKPELYRTTYYGDHTCNRNSLNNEIILDAKPSILISFENNLPTEQAFFSPSSSSSLPMTRTQSKEEIPSSSSEGYLLSPESDHKDPIPDMLYGDFFEHFDF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1407 231 Pfam WRKY DNA -binding domain 98 147 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele37g1407 231 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 102 179 IPR044810 GO:0003700
Lele37g1407 231 MobiDBLite consensus disorder prediction 178 207 - -
Lele37g1407 231 SUPERFAMILY WRKY DNA-binding domain 99 148 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele37g1407 231 SMART WRKY_cls 98 148 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele37g1407 231 MobiDBLite consensus disorder prediction 178 213 - -
Lele37g1407 231 Gene3D WRKY domain 82 148 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele37g1407 231 ProSiteProfiles WRKY domain profile. 98 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1407 Lele-ChrLele37 22811623 22812928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1407 1 150 WRKY Transcription Factor Family AT3G56400 30.208 1.14e-21 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele37g1407 WRKY 8e-13 CL0274