Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1404 ATGGGGTGTTTTACAGTCTTGAAGAGTAAGAAGAAGAAGTCCGAGCAGATCAAGAATGTGAAACGGGTCAACCATAAAGAAAATTTACCTGCTGCAGTACTACCTGAACCTCAAACACCTACGCGCTCACTGCAGTCTGCACCTCCTAGTTTTAGGACCAGAGTGAAACCCATTCAACCCATTAATAACATCACCTACAGTAGAATACGAGCATTATCTGCTCCATCAACTCTTGATGCAGCTGAGCAAGATGCTTTGTCATCTGTTGAGTATGAGGAACAAGATGAGTCAAAATACCGGGCTGGATCAATAAAGGAGCAGCGTTCATCCAGTCCACAACCTTTACCTCTCCCATGTCCTCAGTCTTGTGGTTCATTAAAGGCAACAAGTAGCTTTAAGTCTGTCACAGCTAGTGGTCCTCTCTATGCTTCGGGTCCTTTGCCACTGCCACCTAGTGGATCACTTCGAAACTTCACGTATGAAGAAATTTCTGCTGCTTGCCATAGTTTCTCTTCAGATCGGTGCATGTCAGAAGGTCTTTCTTCCATCATATTTAAAGCTTCTTTCGGTGATGAGGCTTCAAGTTCGAAGAAGTTTGAAGCCACTGTCACTCGCCTTCATCCATCTGCTCAGGGCTTAAGGGAATTCGTGAATGAGGTTAATATCATTGCATCTTTGCAACACCCAAACCTTTGTAAATTGCTTGGTTTTCATGCATGTGAGGGTTCAGAACAGAGAATGTTGGTTTATGAGAGGTTATATCATGGAAGCTTGGACCGCCTATTGCATGGGAGACCTGATGGCCCACCTATTGATTGGAATACAAGGATGAAAATTGCTTTATGTGCTGCTCAAGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTCCAGGCAATGTATAATGAATTTTCAACTGCCAATATTCAGATTGACAAAGATTTCAGCGCAAAGCTTTCAGGTTATGGTTGTGTTGGACATATTCCTGAGGAAGAGGTTTCGAGCAATTCAACGGCTGTTGGAAACCTATCTGTAGAGACTCTGGAAAGAGGAATGCTCACTCCAAAGAGCAACGTTTGGAGCTTTGGAATTGTTCTTCTGGAGTTACTTACTGGAAGAAAGAATCTTGACAGCCGTCACAGCAAAGAAGAGAGGAACTTAGTGAAGTGGAGTCGGCCTTTCCTTGCAGATGATTGTCGACTGTCATTGATCATGGATCCTCAACTTAAAGGCCGGTTTCCGTCCAAAGCAGTGAGGACAGTATCTGACATTGCACTGGGGTGCCTTCAAAACGAACCATCAGAAAGGCCCACCATGAGAACTGTGGTTGAGCATCTCAGAAAAATACAGGATATGAAGCACTCTTGTCGGTTTCCACTGCGAGAGCCTGCGGCAATTTCGGGAAAACAGATGTCAAGGTCACCAAGTCTTAACGGTATCAGTCCTGCGCCTAGATTGAGTTTCTCACCGTCACCGCCTTCAGCAGCCAGACCGTCTATTTCACCTCCAAGATGGTCTGGTGTTCCCCTCTTGCTTCCTCCCCGTGCTTGTGCCTCCACCCTTTCATTGGAGGAGCTTGATCGGCAAGAATCCCGAAAGTCATCATCCTGTGTCTCCAGGAGGGCTAGAGGCTCGGGTGGTTCCGACATCAATTCATTCATGGCGGAAAGGGCGACCTTTATGCTCTCTTCATTTTCCACCATCTTCACTGGCTACTCCCCATTTCCATCCTACTCACTCTCTTCCAAGCACTCCTTCCTTCCAATGCGCCATTTTCATCGGACGTCCTCTTCTACTAGATTTCTTAGGATTTACGCCTTAACAAGCAACGACATCAAAGTGGGTACTAACGTTGAAGTTGGTGGTGCTCCTTGGCGCGTGTTGGAGTTTCTTCACGTCAAACCTGGTAAAGGAGCGGCTTTTGTGAGGACCAAAATGCGAAATTATATTACAGGGAACACTGTGGAGAAAACATTTCGAGCTGGGAGTTCGCTTGACGAGGCAGATGTATTCAAGGAAACGAAACAGTTCACATATAAAGAGGGTCCTCAATTTGTCTTCATGGACTTGAATACATTTGAGGAGATTCGTCTCTTAGAATCAGAAGTTGGAGACAGGAAGAAATGGCTGAAAGAGGGAATGGACTGCAATTTGCTGTTATGGAATGGAAAAGTTATTGATCTTGAGCTTCCCATCACGGTAAAACTCTCTGTAGTTGATGTGGATCCAGGACTCAAGGGTGACACAGCCCAAGGCGGATCAAAGCCTGCAACTCTTGACACTGGCGCTGTTGTGAACGTCCCACTCTTCATAAACACTGGTGACGAAATATTGGTGGACACAAGAACTGGGCTGTACATGAGTCGCGCTTAA 2370 0.457 MGCFTVLKSKKKKSEQIKNVKRVNHKENLPAAVLPEPQTPTRSLQSAPPSFRTRVKPIQPINNITYSRIRALSAPSTLDAAEQDALSSVEYEEQDESKYRAGSIKEQRSSSPQPLPLPCPQSCGSLKATSSFKSVTASGPLYASGPLPLPPSGSLRNFTYEEISAACHSFSSDRCMSEGLSSIIFKASFGDEASSSKKFEATVTRLHPSAQGLREFVNEVNIIASLQHPNLCKLLGFHACEGSEQRMLVYERLYHGSLDRLLHGRPDGPPIDWNTRMKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEVSSNSTAVGNLSVETLERGMLTPKSNVWSFGIVLLELLTGRKNLDSRHSKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPSKAVRTVSDIALGCLQNEPSERPTMRTVVEHLRKIQDMKHSCRFPLREPAAISGKQMSRSPSLNGISPAPRLSFSPSPPSAARPSISPPRWSGVPLLLPPRACASTLSLEELDRQESRKSSSCVSRRARGSGGSDINSFMAERATFMLSSFSTIFTGYSPFPSYSLSSKHSFLPMRHFHRTSSSTRFLRIYALTSNDIKVGTNVEVGGAPWRVLEFLHVKPGKGAAFVRTKMRNYITGNTVEKTFRAGSSLDEADVFKETKQFTYKEGPQFVFMDLNTFEEIRLLESEVGDRKKWLKEGMDCNLLLWNGKVIDLELPITVKLSVVDVDPGLKGDTAQGGSKPATLDTGAVVNVPLFINTGDEILVDTRTGLYMSRA 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1404 789 Pfam Elongation factor P (EF-P) OB domain 675 725 IPR001059 GO:0003746|GO:0006414
Lele37g1404 789 SUPERFAMILY Protein kinase-like (PK-like) 148 455 IPR011009 -
Lele37g1404 789 Gene3D - 598 667 IPR014722 -
Lele37g1404 789 CDD S1_EF-P_repeat_2 733 788 IPR015365 GO:0005737|GO:0043043
Lele37g1404 789 CDD S1_EF-P_repeat_1 675 730 IPR001059 GO:0003746|GO:0006414
Lele37g1404 789 SUPERFAMILY Nucleic acid-binding proteins 732 789 IPR012340 -
Lele37g1404 789 ProSitePatterns Elongation factor P signature. 754 773 IPR013852 -
Lele37g1404 789 MobiDBLite consensus disorder prediction 38 56 - -
Lele37g1404 789 MobiDBLite consensus disorder prediction 464 500 - -
Lele37g1404 789 SMART EFP_2 671 725 IPR001059 GO:0003746|GO:0006414
Lele37g1404 789 SUPERFAMILY Translation proteins SH3-like domain 607 667 IPR008991 -
Lele37g1404 789 Gene3D Phosphorylase Kinase; domain 1 151 251 - -
Lele37g1404 789 Pfam Protein tyrosine and serine/threonine kinase 177 445 IPR001245 GO:0004672|GO:0006468
Lele37g1404 789 PANTHER ELONGATION FACTOR P 574 789 IPR020599 -
Lele37g1404 789 MobiDBLite consensus disorder prediction 84 120 - -
Lele37g1404 789 SUPERFAMILY Nucleic acid-binding proteins 671 733 IPR012340 -
Lele37g1404 789 FunFam Organellar elongation factor P 599 667 - -
Lele37g1404 789 SMART Elong_fact_P_C_2 733 788 IPR015365 GO:0005737|GO:0043043
Lele37g1404 789 TIGRFAM efp: translation elongation factor P 607 789 IPR011768 GO:0003746|GO:0005737|GO:0006414
Lele37g1404 789 FunFam Elongation factor P 732 789 - -
Lele37g1404 789 Pfam Elongation factor P (EF-P) KOW-like domain 608 663 IPR013185 -
Lele37g1404 789 FunFam Elongation factor P 668 731 - -
Lele37g1404 789 MobiDBLite consensus disorder prediction 468 484 - -
Lele37g1404 789 MobiDBLite consensus disorder prediction 1 56 - -
Lele37g1404 789 Gene3D Transferase(Phosphotransferase) domain 1 253 459 - -
Lele37g1404 789 Pfam Elongation factor P, C-terminal 733 788 IPR015365 GO:0005737|GO:0043043
Lele37g1404 789 Hamap Elongation factor P [efp]. 605 789 IPR011768 GO:0003746|GO:0005737|GO:0006414
Lele37g1404 789 MobiDBLite consensus disorder prediction 522 547 - -
Lele37g1404 789 ProSiteProfiles Protein kinase domain profile. 170 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g1404 789 Gene3D - 668 730 IPR012340 -
Lele37g1404 789 Gene3D - 732 789 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1404 Lele-ChrLele37 22780273 22787498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1404 149 449 Receptor kinase-like Gene Family AT4G02010 38.436 9.06e-57 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Lele37g1404 PK_Tyr_Ser-Thr 3.7e-25 CL0016