Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1401 ATGAGTTACAGCGACAGGAACAGAGGAGCAAAAGAGAGGGAATGTGAAGAGTCGGTCTTGCAGAATTCTGGGGAATTAGAGTCCAAATCGGTTGGGCAGAATGGATCGATTGCAACCCCACCGCTAACAATCGATGAGAATCTTCTGGTTGACCCTAAACAACTCTTCATTGGGTCAAAAATCGGTGAAGGAGCTCATGGGAAGGTTTATGAAGGAAGGTATGGAGATCAAATTGTGGCAATTAAGGTTCTGCATCGTGGGAGCACTTCAGAAGAAAGAGCAGCCCTTGAAAATCGTTTTGCTAGGGAGGTTAATATGATGTCCCGTGTCCATCATGAGAATCTGGTTAAGTTTATTGGAGCTTGCAAGGATCCTCTGATGGTTATAGTCACAGAGCTGTTACCGGGGATGTCGCTGAGGAAATATTTGACTAGCATACGCCCTGGACTGCTAGACTGTCAGGTGGCTATAAACTTTTCCCTTGATGTTGCTCGGGCCATGGATTGCCTACACGCTAATGGGATCATACATAGAGATTTGAAACCTGATAATCTGTTGCTTACGGCAAATCAGAAGTCTGTAAAACTTGCAGATTTTGGTCTTGCAAGAGAAGAATCTGTCACTGAAATGATGACTGCAGAAACTGGAACTTACCGTTGGATGGCGCCAGAGCTGTACAGTACTGTGACATTACGTCAAGGAGAGAAAAAACACTACAACAACAAGGTTGATGTGTACAGCTTTGGGATTGTTTTGTGGGAACTTTTAACGAATCGCTTGCCTTTTGAAGGGATGTCTAATTTACAAGCTGCTTACGCTGCTGCTTTTAAGCATGAGAGGCCTAGCCTTCCAGAAGATATACCTCCTGATCTTGCCTTTATCATACAATCGTGCTGGGTTGAGGATCCCAACTTGAGACCGAGCTTTAGTCAGATAATCCGTATGCTTAACGCCTTTCTCTTCACTTTGTCACCTGCGCCGCCCTCCCCTAGTTCGCAGGAACCTGAAAATGTTGAACCTGAGGCTTCAGCAACTACAAGTAACGGTGCCATAACTGAGTTGTCTGCCCGAAACAGAGGAAAGTTTGGATTTCTTCGCCATTTGTTCACTTCGAAAAGGACCAAAAACTAA 1131 0.4483 MSYSDRNRGAKERECEESVLQNSGELESKSVGQNGSIATPPLTIDENLLVDPKQLFIGSKIGEGAHGKVYEGRYGDQIVAIKVLHRGSTSEERAALENRFAREVNMMSRVHHENLVKFIGACKDPLMVIVTELLPGMSLRKYLTSIRPGLLDCQVAINFSLDVARAMDCLHANGIIHRDLKPDNLLLTANQKSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHERPSLPEDIPPDLAFIIQSCWVEDPNLRPSFSQIIRMLNAFLFTLSPAPPSPSSQEPENVEPEASATTSNGAITELSARNRGKFGFLRHLFTSKRTKN 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1401 376 Pfam Protein tyrosine and serine/threonine kinase 57 316 IPR001245 GO:0004672|GO:0006468
Lele37g1401 376 MobiDBLite consensus disorder prediction 327 354 - -
Lele37g1401 376 MobiDBLite consensus disorder prediction 1 20 - -
Lele37g1401 376 SMART serkin_6 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g1401 376 MobiDBLite consensus disorder prediction 335 354 - -
Lele37g1401 376 PRINTS Tyrosine kinase catalytic domain signature 287 309 IPR001245 GO:0004672|GO:0006468
Lele37g1401 376 PRINTS Tyrosine kinase catalytic domain signature 169 187 IPR001245 GO:0004672|GO:0006468
Lele37g1401 376 PRINTS Tyrosine kinase catalytic domain signature 131 144 IPR001245 GO:0004672|GO:0006468
Lele37g1401 376 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Lele37g1401 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Lele37g1401 376 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 51 318 - -
Lele37g1401 376 ProSiteProfiles Protein kinase domain profile. 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g1401 376 FunFam Kinase suppressor of Ras 1 44 134 - -
Lele37g1401 376 Gene3D Phosphorylase Kinase; domain 1 44 134 - -
Lele37g1401 376 MobiDBLite consensus disorder prediction 1 34 - -
Lele37g1401 376 ProSitePatterns Protein kinases ATP-binding region signature. 61 82 IPR017441 GO:0005524
Lele37g1401 376 Gene3D Transferase(Phosphotransferase) domain 1 138 353 - -
Lele37g1401 376 CDD STKc_MAP3K-like 61 316 - -
Lele37g1401 376 SUPERFAMILY Protein kinase-like (PK-like) 47 336 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1401 Lele-ChrLele37 22760520 22763405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1401 43 376 MAP Kinase Kinase Kinase AT5G01850 72.626 0.0 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele37g1401 PK_Tyr_Ser-Thr 3.4e-59 CL0016