Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1384 ATGGGAGGTTGTTGCAGTTGTGAGATTTCTTGTGGAGGCAAGGTGATTAGGAACATGGATGATAAAGAATATGATCGCCGAGAGTGCGAGGATATTGCTTATTCAGATTCCGGAGCTCGAATCAGATTAAGAGGTTCCTCTAAGTTTATATCAATGTACTGCCAACAAGGAAGTAAAGGGATTAACCAAGATGCATTAACAGTTTGGGAGGGCCTTAATGGAGAAAAAGGCATGATCTTCTGTGGTGTGTTTGATGGTCATGGTCCTCTTGGGCACAAGGTTTCACAATATATACGTGACAATCTTCCCGCAAAACTCTCTGAATCAATCAAAATGACTCAACAGAAGAAGGTCAGCAAACTCTGGGAACCTTATCCCGGAGAAAGAAGCCGCCATGTTAATAATGACCAAAACATGTCCCCTGCTTCATGGGAGCGCAGCCTTGTCAAATCTTTCAATGAGATGGATGGAGACGTTGCTCGAGACATCAACACCGACAGCTTTTCCAGCGGTACCACTGCTGTAACTGTAATTCAACAGGGAGACCAGCTGATAATTGCAAATTTGGGAGATTCTCGAGCAGTTCTTTGCACGAGAGGAGATAATGACGAGCTCAATCCTGTGCAACTCACTGTGGACTTGAAACCTGATATTCCAAGCGAAGCCACGAGAATCCAAAATTGTGAAGGCAGAGTTTTCGCTGCAGCAGAAGAATCACAAGTATACAGAATATATATGCCTGATGAGGACGCTCCTGGACTAGCTATGTCAAGAGCCTTTGGAGATTTCTGCCTGAAAGATTATGGCCTCATCTCAGTTCCTGACGTCTTCCATAGAAAAATAACAGAGCATGATGAATTCGTAGTGTTGGCAACAGATGGGATTTGGGATGTGCTATCAAACGCGGAAGTGATAAGCATAGTTGCTTCTGCGCCAAGCAGGTCCACGGCAGCAAAACTGTTAGTAAGGCATGCTGTTTCTGTATGGAGACACAGGTATCCTAATGCAAAGATCGATGATTGTGCAGTGATATGCTTGTTCCTGCATGAACCGCCTGCTTTACCCGATTCTCCATCTGCTAGGAGCCACTTAAATCAAAGGAGGCAACTCAGTCCACATGTCTCCAAAGCCACTAGAAATGATGGCACTGAAAGTTGGTTAGATGATGGCAAGAGTTCTATAATAACATTAGGGCAAGAATTGGATGCTAGTTCAAAATTGTCCATGGCCAACTCTGTGACATATTCAAAATATCCACGACTCACTACGGTTGTGAGTAGAAAATCTTCTCAGTGCGTTGATGGGGTTGAAGTTCATTAG 1320 0.4402 MGGCCSCEISCGGKVIRNMDDKEYDRRECEDIAYSDSGARIRLRGSSKFISMYCQQGSKGINQDALTVWEGLNGEKGMIFCGVFDGHGPLGHKVSQYIRDNLPAKLSESIKMTQQKKVSKLWEPYPGERSRHVNNDQNMSPASWERSLVKSFNEMDGDVARDINTDSFSSGTTAVTVIQQGDQLIIANLGDSRAVLCTRGDNDELNPVQLTVDLKPDIPSEATRIQNCEGRVFAAAEESQVYRIYMPDEDAPGLAMSRAFGDFCLKDYGLISVPDVFHRKITEHDEFVVLATDGIWDVLSNAEVISIVASAPSRSTAAKLLVRHAVSVWRHRYPNAKIDDCAVICLFLHEPPALPDSPSARSHLNQRRQLSPHVSKATRNDGTESWLDDGKSSIITLGQELDASSKLSMANSVTYSKYPRLTTVVSRKSSQCVDGVEVH 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1384 439 ProSiteProfiles PPM-type phosphatase domain profile. 49 348 IPR001932 -
Lele37g1384 439 PANTHER PROTEIN PHOSPHATASE 47 346 - -
Lele37g1384 439 Gene3D - 43 350 IPR036457 -
Lele37g1384 439 SUPERFAMILY PP2C-like 46 351 IPR036457 -
Lele37g1384 439 MobiDBLite consensus disorder prediction 357 385 - -
Lele37g1384 439 CDD PP2Cc 49 348 IPR001932 -
Lele37g1384 439 SMART PP2C_4 40 346 IPR001932 -
Lele37g1384 439 Pfam Protein phosphatase 2C 74 326 IPR001932 -
Lele37g1384 439 MobiDBLite consensus disorder prediction 359 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1384 Lele-ChrLele37 22621594 22623799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1384 1 352 PP2C-type Phosphatase Gene Family AT5G01700 51.397 1.75e-120 354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0204 42 1681083 1681991 Lele37g1384 37 22621594 22623799 CCT
Lele43g1152 43 19902263 19903192 Lele37g1384 37 22621594 22623799 CCT
Lele44g1143 44 20054743 20055650 Lele37g1384 37 22621594 22623799 CCT
Lele37g1384 37 22621594 22623799 Lele39g0041 39 307259 312343 hybridization