Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1365 ATGATGCATCATCAGACTCTTCTTCAGCCCCCCACCTGGTCAGTCCCCAATGACATCACCTCTGTTATCGATCCATTCGATCTTCCCCCCACCTTCTTCTTTGAAAATCATTTCCCATATCCAGTTGAAATGGGATCAGAAGCATCCAAATCCATAGAGAATTATTCCTCCTTCAATGAATTTGAAGTTTCTTCTGTCTTCTTCTCTCAAGATAATTTCCAGTACCCAGTTCATGAAGAAGATATTCTGGGAATATCATCCATGGACTGGGATCCTCTTGAACCTGATTTCAGTACCCAGTTTTTGAATATCCATGGATACCCAGAAGACAGTGAAGAAAGCTTTCAAACTTCCCAGAATCTATCTTCTGCAGCAGAAGATTCTTGGAGTTCTAGTCCATCCTCTCTTCAACTACCATCGTTGAACTTGCCTCAAGAAGACATGGAAATGGATACCCACGTGATTCTTCCGCATCTCCTTGAGGCCCATTTTGAGGCGAGAGATCAGAACCAGCATGCTCTGGTAGAAGAAACCCTGAGATGCATAAGCCAGAAAACAAACCCAGTTGCAGAAGATCCTCAGGAACGCCTAGCATTCCACTATTCCTCACAAAACATCACAGGAAATCCAGAGGGGCATTTCCTCAAACAGGAGGCGTGCAAAAATTTTGATCCTGCATTCAAGGTATTTTACCAAATCACCCCCCATGGAAGATTTGCTCATTTTGCAGCCAATTCAGCAATTCTAGAAGCCTTACCAGAGGATTCTGAAGTTATACACATAATAGACTTCGACATGGGAGAAGCAGTTCAGTGGCCTCCTGTGATAGAGGCCATTTCTCAACAGAACAAGGCGCTCAAGTTAACATCAATCAAATGGGAAGCAGAGCAAGAAGACTCTGACGAACCCGGAAGGAGGAACCTTATTGAACACGCAAGATCATGTGGTCTCAAGATGAAGATAGAAGAAAAGAGTTTTGAGGAATTAGTTACAGAACACAAGAAATTGAACAAAAGAGGTGGGAATGTGAAGAGAGATTTTGTAATCTTTAATTGCATGGTGGGCCTTCCTCACATGGGGAGAGGAAGAAGCAGAAGATCAGTCATGGAGTTTCTAAATTTAGGGAAGAACATGATCAACAAGAACAGCTGCAACAGGGGAATCATCACTTTTGGGGACGGAGAAGCCGACGACAAGCTGAGAAATAGCCTCAACTTGAGGTCATTCTTTGACGGAAACATGAGGCATTACAGGGCCCTAATGGAATCAATTGAATCAAATTTCCCAGCTTGTTTCTCACAAGCAAGAACAGCGATAGAGTTCTTATTCGTGGGACCCTATGTGTCTTCCGTTGCTTGGACGAAGAAGTGGGAAGAAGTGAGAGGAAATTGTCATTTTCATGCAGGGAACGGAAGAAGATTGAGCCAAGAGATCTTGATGGAAGCGAGGGAAACGTTGGGAGGAAGCAGCAGGGAGGGGTCATATGAGGCAAGGATTGAAGGGCAAAATGGGAATGAGATGGTTCTCTTGTGGAAAGGGACACAGCTAGTCAAAGTATCAACATGGGGAAGTCAAAAGGCCTGA 1584 0.44 MMHHQTLLQPPTWSVPNDITSVIDPFDLPPTFFFENHFPYPVEMGSEASKSIENYSSFNEFEVSSVFFSQDNFQYPVHEEDILGISSMDWDPLEPDFSTQFLNIHGYPEDSEESFQTSQNLSSAAEDSWSSSPSSLQLPSLNLPQEDMEMDTHVILPHLLEAHFEARDQNQHALVEETLRCISQKTNPVAEDPQERLAFHYSSQNITGNPEGHFLKQEACKNFDPAFKVFYQITPHGRFAHFAANSAILEALPEDSEVIHIIDFDMGEAVQWPPVIEAISQQNKALKLTSIKWEAEQEDSDEPGRRNLIEHARSCGLKMKIEEKSFEELVTEHKKLNKRGGNVKRDFVIFNCMVGLPHMGRGRSRRSVMEFLNLGKNMINKNSCNRGIITFGDGEADDKLRNSLNLRSFFDGNMRHYRALMESIESNFPACFSQARTAIEFLFVGPYVSSVAWTKKWEEVRGNCHFHAGNGRRLSQEILMEARETLGGSSREGSYEARIEGQNGNEMVLLWKGTQLVKVSTWGSQKA 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1365 527 Coils Coil 319 339 - -
Lele37g1365 527 MobiDBLite consensus disorder prediction 110 140 - -
Lele37g1365 527 ProSiteProfiles GRAS family profile. 147 523 IPR005202 -
Lele37g1365 527 MobiDBLite consensus disorder prediction 109 140 - -
Lele37g1365 527 Pfam GRAS domain family 158 522 IPR005202 -
Lele37g1365 527 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 135 512 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1365 Lele-ChrLele37 22532493 22534076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1365 147 522 GRAS Transcription Factor Family AT5G66770 24.627 3.92e-13 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele37g1365 GRAS 1.2e-34 CL0063