Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1358 ATGAATAATACTGTTGCCCCGGCTTATCAAGAACACCTCCCTGCTGCTCCTGGTTGGCTAAACAAAGGAGATAACGGATGGCAGTTGACCGCAGCCACACTGGTGGGTATTCAGAGCATGCCAGGGCTTGTGATTCTGTATGCAAGCATCGTCAAGAAGAAATGGGCTGTCAATTCTGCTTTCATGGCTCTCTATGCCTTCGCTGCTGTTCTAATCTGTTGGGTCCTTGTTTGTTTCAGAATGGCCTTTGGAGATGAACTCCTTCCCTTCTGGGGTAAGGGTGCCCCAGCTCTAGGCCAGAAATTCCTCATAAAACGAGCCAAGGTCCCTGAAAGTGCTCACCTTTACAGCAATGGCACTTTAGAAACCCCGATGGTAGAGCCATTTTTTCCCATGGCTTCACTTGTGTACTTTCAATTCACTTTTGCTGCTATAACGCTTATCCTGCTGGCTGGTTCGGTTCTTGGTCGCATGAACATTAAGGCCTGGATGGCTTTTGTCCCTCTTTGGCTCATTTTCTCATACACCGTTGGGGCATTCAGCTTATGGGGCGGCGGTTTCCTTTACCACTGGGGCGTCATCGATTACTCCGGCGGCTACGTTATCCACCTCTCCTCCGGAATCGCCGGCTTCACCGCCGCATACTGGGTGGGACCGAGGCTGAAGAGCGACAGGGAGAGGTTTCCACCGAACAATGTGCTGCTGATGCTTGCTGGAGCGGGTCTTCTATGGATGGGGTGGTCGGGGTTCAACGGCGGAGCACCGTACGCGGCGAGCGTTGACTCGTCGATAGCAGTGTTGAACACAAACATATGCGCGGCGACGAGCCTTTTGGTATGGACGTCACTGGACGTCGTCTTCTTTGGGAAGCCCTCGGTGATCGGAGCCGTTCAGGGTATGATGACCGGACTTGTTTGCATCACCCCGGGAGCAGGGTTGGTGCAACCGTGGGCGGCTATAGTAATGGGAATCCTGTCAGGCAGCATTCCATGGTTCACAATGATGATCCTTCACAAAAAATCTTCTCTCCTTCAACAGGTTGATGACACGCTGGGAGTATTTCACACACACGCAGTGGCGGGCCTTATGGGTGGCCTCCTAACTGGTTTGTTGGCAGAGCCGCAGCTTTGTCGGCTGACTTTGCCGGTGACCAACGCGAGGGGCGCCTTCTATGGCGGCAGTGGTGGCATGCAGTTCGTGAAGCAGATTGTGGCGGCCCTATTTGTGACCGGATGGAACTTGGTGTCCACCACTCTCATTCTTCTGGCCATTCGTCTGTTTATACCGTTGAGAATGCCGGATGAGCAGCTTGAGATCGGCGATGACGCTGTGCACGGGGAGATGGCCTATGCACTTTGGGGCGACGGAGAGAGATATGAACCTAACAAGCAGGGCTCAGACAGTCATGCTTCTACAGTTTCACCTTATGTGACCGGTGCAAGAGGCGTCACCATAAATTTATAG 1464 0.5301 MNNTVAPAYQEHLPAAPGWLNKGDNGWQLTAATLVGIQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLICWVLVCFRMAFGDELLPFWGKGAPALGQKFLIKRAKVPESAHLYSNGTLETPMVEPFFPMASLVYFQFTFAAITLILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWGGGFLYHWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAASVDSSIAVLNTNICAATSLLVWTSLDVVFFGKPSVIGAVQGMMTGLVCITPGAGLVQPWAAIVMGILSGSIPWFTMMILHKKSSLLQQVDDTLGVFHTHAVAGLMGGLLTGLLAEPQLCRLTLPVTNARGAFYGGSGGMQFVKQIVAALFVTGWNLVSTTLILLAIRLFIPLRMPDEQLEIGDDAVHGEMAYALWGDGERYEPNKQGSDSHASTVSPYVTGARGVTINL 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1358 487 ProSitePatterns Ammonium transporters signature. 195 220 IPR018047 GO:0008519|GO:0016020|GO:0072488
Lele37g1358 487 Gene3D Ammonium transporter AmtB like domains 3 453 IPR029020 -
Lele37g1358 487 PRINTS Rhesus blood group protein signature 139 155 IPR002229 GO:0005886
Lele37g1358 487 PRINTS Rhesus blood group protein signature 234 252 IPR002229 GO:0005886
Lele37g1358 487 PRINTS Rhesus blood group protein signature 320 338 IPR002229 GO:0005886
Lele37g1358 487 PRINTS Rhesus blood group protein signature 265 287 IPR002229 GO:0005886
Lele37g1358 487 PRINTS Rhesus blood group protein signature 358 374 IPR002229 GO:0005886
Lele37g1358 487 SUPERFAMILY Ammonium transporter 19 432 - -
Lele37g1358 487 PANTHER AMMONIUM TRANSPORTER MEP2 11 461 IPR001905 GO:0008519|GO:0016020|GO:0072488
Lele37g1358 487 Pfam Ammonium Transporter Family 27 450 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lele37g1358 487 TIGRFAM amt: ammonium transporter 24 450 IPR001905 GO:0008519|GO:0016020|GO:0072488
Lele37g1358 487 FunFam Ammonium transporter 8 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1358 Lele-ChrLele37 22488688 22490965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1358 132 487 Inorganic Solute Cotransporters AT2G38290 74.652 0.0 532