Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1355 ATGGAGTACAACATTCCTCCTACCAGCAACCTTACCTCATCAACAGCGTCATCTTCGAAGGCGAGGAGAAAGAGCGGGAAGAAAAGCAAGGGAGGAGTGAAGCTTTCCACTAATCCACAGAGCGTGGCAGCTCGAGAACGAAGGCATCGAATCAGCGATCGGTTCAAGATCTTGCAGAGCATGGTCCCTGGTGGGAGTAAGATGGACACGGTGTCGATGTTAGAGGAAGCGATTCATTACGTGAAGTTTCTGAAAACTCAGATATGGCTCCACAAAACCATGATCAACTCTGTTGACGATGACTACCTTCCATTTCCCAACCATGAACAGTTCCCTTCTCTTCTACAAAACCCATCTTCAGTGCAGAATTTGACACAGATACCACTGTAA 390 0.4718 MEYNIPPTSNLTSSTASSSKARRKSGKKSKGGVKLSTNPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHKTMINSVDDDYLPFPNHEQFPSLLQNPSSVQNLTQIPL 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1355 129 FunFam Transcription factor LAX PANICLE 38 101 - -
Lele37g1355 129 Pfam Helix-loop-helix DNA-binding domain 45 84 IPR011598 GO:0046983
Lele37g1355 129 Gene3D - 39 93 IPR036638 GO:0046983
Lele37g1355 129 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 40 95 IPR036638 GO:0046983
Lele37g1355 129 SMART finulus 41 90 IPR011598 GO:0046983
Lele37g1355 129 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 35 84 IPR011598 GO:0046983
Lele37g1355 129 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 7 122 IPR045843 GO:0003700|GO:0006355
Lele37g1355 129 CDD bHLH_AtIND_like 36 95 - -
Lele37g1355 129 MobiDBLite consensus disorder prediction 1 20 - -
Lele37g1355 129 MobiDBLite consensus disorder prediction 1 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1355 Lele-ChrLele37 22470940 22471329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1355 27 121 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 44.118 3.49e-22 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele37g1355 HLH 3.1e-08 No_clan