Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1318 ATGGAGGGCCATCATCTACATCATCCTTACCCTCATCATCCTCTTCATCTTCATCGTCAACAACAACAGCAACCTCAGCAACATCATCAGCTGCAGCAACATAGTATTGGGGGTGTTACGGCGGCGGTTAACGTTGTTGATGTCGGAGAAAGGTTTCCTCAATGGAGTATTCAAGAAACGAAGGAGTTCTTGATGATGAGGGCAGAGCTGGATCAGGCTTTTATGGAGACGAAGAGGAACAAGCAGTTATGGGAAGTTATTTCCAACAGGATGAAGGAAAAGGGTTACCTTCGAAGCCCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTCGTCACCAGGTACAAGGGATGTGAAACAATGGAGGCAGAAGCTCTGAGGCAGCACTTCCCATTTTACAACGAGCTTCAGTTGATATTCGCGAGTAGGATGCAGAGAATGCTGTGGGCAGAAGCCGAAGGAGGAGCCGGCGGATCGAAGAAGAAGGCCCCGGAGAATCTGTCATCAGAAGATGAAGAAGAAGAAGATAACAACAACAAAGAAGATAGTGAAGGGGATCAGAAAGGTGCAACAAGTAGCGGCAGAAAGAAGAAGAAGAAGGGAATTAGGGGTCGTAGTAGTGGTGGTAATTATTGTACTATTAATGAGAGCTTGAAGGAGATGAAGGAGATATTGCAGGACTTTATGAGGCAACAGATGCAAATGGAGTCACAGTGGATGGAAGTTTATGAAGCGAGGGAGAAGGAGAGAAGAATGAAGGAGCTTGAATGGAGGCAAACAATGGAGGCATTGGAGAATGAGAAGATAATGATGGATCAGAGATGGAGAGAGAGAGAAGATCAACGCAGGCTTAGAGAAGAAGCTAGGGCTGAGAAAAGTGATGCTCTTATCACTGCTCTTCTAAACAAGCTCTCAAGAGAAGACATGTAG 927 0.4585 MEGHHLHHPYPHHPLHLHRQQQQQPQQHHQLQQHSIGGVTAAVNVVDVGERFPQWSIQETKEFLMMRAELDQAFMETKRNKQLWEVISNRMKEKGYLRSPEQCKCKWKNLVTRYKGCETMEAEALRQHFPFYNELQLIFASRMQRMLWAEAEGGAGGSKKKAPENLSSEDEEEEDNNNKEDSEGDQKGATSSGRKKKKKGIRGRSSGGNYCTINESLKEMKEILQDFMRQQMQMESQWMEVYEAREKERRMKELEWRQTMEALENEKIMMDQRWREREDQRRLREEARAEKSDALITALLNKLSREDM 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1318 308 MobiDBLite consensus disorder prediction 1 35 - -
Lele37g1318 308 MobiDBLite consensus disorder prediction 17 35 - -
Lele37g1318 308 Gene3D - 55 116 - -
Lele37g1318 308 Pfam Myb/SANT-like DNA-binding domain 54 136 IPR044822 -
Lele37g1318 308 FunFam Zinc finger and SCAN domain-containing 20 55 116 - -
Lele37g1318 308 PANTHER FI21293P1 21 304 - -
Lele37g1318 308 Coils Coil 217 237 - -
Lele37g1318 308 ProSiteProfiles Myb-like domain profile. 55 111 IPR001005 -
Lele37g1318 308 MobiDBLite consensus disorder prediction 151 211 - -
Lele37g1318 308 CDD GT1 53 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1318 Lele-ChrLele37 22238515 22239942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1318 27 306 Trihelix Transcription Factor Family AT2G38250 54.448 3.34e-69 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele37g1318 Myb_DNA-bind_4 1e-18 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1318 37 22238515 22239942 Lele41g0143 41 1081978 1085009 CCT
Lele37g1318 37 22238515 22239942 Lele42g0142 42 1129820 1133464 CCT
Lele37g1318 37 22238515 22239942 Lele43g1216 43 20495459 20498443 CCT
Lele37g1318 37 22238515 22239942 Lele39g0093 39 630173 631603 hybridization
Lele37g1318 37 22238515 22239942 Lele40g1151 40 21586069 21587557 hybridization