Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1314 ATGGCTTCCAATCGCTCTCCTTCCGATGCCTATGCAAAAGAACGCCTTCGTTGGACTCAGCAACTCCATGATCTCTTCGTTGAAGCTGTAAACAGACTTGGTGGCCCTGATAGAGCAACACCAAAGAGTATAGTGAAGGAGATGACGAGTAAGGGAGTATCTGGAATCACCATTTATCACGTCAAGAGCCACTTGCAGAAATACAGGATCAACAAGTTGATTCCAGAGTCTGCTACCAGAAGTAAGCTTGAGAGAAGAAGCATATCGGACATACTGCCTAATTTCAGCACATTAACAACGCTGCAGCTAAAGGAAGCTCTGCAGTTGCAAATGGAAGTACAAAAACGCTTGAACGACCAACTAGAGCTAAAAATGGAAGCTCAAGGGAAGTACTTGGAGAGACTGGGCCAAAGTTATCAAAGCCAAACCATCTCCAGAAAACCTGCTGGGAATAAGCTTCGTACTAATAATACTTCACCTACTACATCGATGCCTTGTCTTTCTGAGGAATCCGATGATTCCAACGTTGTCACACACAAAAAACAAAGAGTCGTCAACGGTGATACCATTAGGGTTAATTTCCCAACTACTTCTACATCTTCATCTTCATCACCCACTCCAGAATTCTGCAACCAAAACTGGGACCTACTTCCTTGGAATCAGCTCGCAGCTTCGTTTCAATGTCAATCGCCTTTGGTTCCAAGCTTCTTGTTGTGA 717 0.4407 MASNRSPSDAYAKERLRWTQQLHDLFVEAVNRLGGPDRATPKSIVKEMTSKGVSGITIYHVKSHLQKYRINKLIPESATRSKLERRSISDILPNFSTLTTLQLKEALQLQMEVQKRLNDQLELKMEAQGKYLERLGQSYQSQTISRKPAGNKLRTNNTSPTTSMPCLSEESDDSNVVTHKKQRVVNGDTIRVNFPTTSTSSSSSPTPEFCNQNWDLLPWNQLAASFQCQSPLVPSFLL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1314 238 MobiDBLite consensus disorder prediction 142 175 - -
Lele37g1314 238 Gene3D - 12 73 - -
Lele37g1314 238 FunFam Two-component response regulator 10 73 - -
Lele37g1314 238 Coils Coil 104 124 - -
Lele37g1314 238 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 73 IPR017930 -
Lele37g1314 238 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 13 71 IPR006447 GO:0003677
Lele37g1314 238 MobiDBLite consensus disorder prediction 142 172 - -
Lele37g1314 238 Pfam MYB-CC type transfactor, LHEQLE motif 102 135 IPR025756 -
Lele37g1314 238 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 182 IPR044848 GO:0003700
Lele37g1314 238 Pfam Myb-like DNA-binding domain 16 69 IPR001005 -
Lele37g1314 238 SUPERFAMILY Homeodomain-like 11 70 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1314 Lele-ChrLele37 22198904 22201292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1314 9 135 G2-like Transcription Factor Family AT4G28610 48.921 6.90e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele37g1314 Myb_DNA-binding 1.4e-06 CL0123