Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1310 ATGGTGGGAAAGATAGGCGCTACTTCGCGGGAAAAGCTCGCGAGTCTTGTGAACTCTGTCAAGTTGGCCATGGATATACCCTCCAAGCTCGATTACTTGCGGCAACTGAAGCTAGAGTTGCCTCAGGAAGACCCCGTTTTGCTTACCGAGTTTCTTCCCTGTCTCTTCGATTTTCAGTCCGACCGTTTCAGTCCAGTTCGCAAATTTGTCACCGAGATGCTTGGTGAAATTGGATCTAACAACACGGAGTTCTTGCCTGACATTATACCTGTGCTCCTTGCTGTTTTGGATGATGATACGCCTGCTGTTGTTCGTCAAGCTATATCGTGTGGAGTTAATTTATTTCATTCCACTCTTGGGAAAATTGCAATACAGGGTCTATACTCCAGTGATCTGGACAGTGCACTTGAATCTGCATGGGCATGGATGGTAAAGTTCAAAGACAAAGTATACTCACTTGCTTTTCAACATGGTAGTGGTGGCACAAAGTTGCTGGCACTGAAGTTTGTTGGAGCAGTTATTCTTCTATACACACCAGATCCAAATGGTTCCTCAGAGGCCCCTCCTCATCAAGGAGGGATTAGGGAGTTTAACGTATCATGGATTCGCAAGGGTCATCCTGTACTCAACTTTAAAGATTTGTCAATTGATGCTAGTCGTAGTTTGGGTCTTCTGCTTGATCAACTCAGATTTCCAACAGTGAATTCTCTCAGTAACTCAGTGACTGTTGTGCTAATTAACAGCCTTTCAGCAATTGCAAAAGATAGGCCTACATTCTATGGCCGCATTTTGCCAGTTTTGCTTGGTTTGGAACCATCAAGCTCTGTTGTTAATGGGATCTGTATAACAGCAGTACATCATGCGATGAAAAATGCCTTTCTCACCTGCTTGAAATGTACACATCCAAGCGCTGCTCCGTGGAGAGAACGTTTGGCAGGTGCGTTGGAGGAAATGCAGTCTGAAGGGATGGCAGATCAGGTGTTCCACCGAGTTTCTGAGATTAATGGAAGTATAAAGAAAAAGAAAGATGATGGTCTATATATTAAGCAAGAAAAACCAGCTATACCTTCATTTGATTCATTGCACAGTAATTTGGGGAGGAAACGATCAGGATCGCAGGATGGAAGTGATTTAGCTGAAGATGATGTTCCTGATAAACGTGTCAAAACAACAACCATTGTCTTAGAACCTAAGAAAGAGTTAGATGGAAGCACAACAGTGTCTCAATACAGCAATGCAACTCCACCTCTTTCATCAAAAAGAGAAGTGGACAATGGACCTGTTCAGCAACTTGTTGCAATGTTTGGTGCTTTGGTTGCTCAGGGTGAAAAAGCTGTTGCATCTTTGGAGATTCTTATCTCAAGTATCTCCTCAGATTTGCTAGCTGAGGTGGTAATGGCTAATATGTGTAACCTGCCTCCAAACAATCCAACTGCTGAAGGAGATGATGAGCCACTGCATGACATCAGTATAATAGGTTCTGATAGCAACGCTAAATATCCACCATCATTTGTTGATAGTGTCTTGTCGCTTTCTAGTGCATTCCCATCAATAGCTTCACTTCTTGATGTCAATCAATCGATATCCAATGAGAAATCTCAAGGGGAAGAAGAAAATTCTGCAACTGGAGTGGATGGTAATGTTGTGCATTCTGGATTGAATCTTTCATCTGAAAATGTGATGATGTCCTCTGATTTTCCATCTTCTGATGCCAAAATACCGGGAGTGGAGAGTGTGAGCACACCTGCCCCTCCTGACATCCATGATGCGGGCAATTTAGAGAGTGGAATACCTGGCCTGGAATCTTTTGGTCGTAGTGACACCTTGTCAGAAACTGTAGTGGCTTTGGCTTCCTCCGATATAGAAGAAGCTAGTCAAGAGCAAGTTACGAGTTTTGGTCAAAGATCACCCCTTGACACGGTTCCATCAATCTCAACAGATAGGTCTGAGGAGATGAGCCCAATAGCAGCTGTTATTGATGTAAATAGTGCAGTATCCTCAGCAGCAACTTCTGACAGGTCAGCATCTCGGTTGGTTCTGCCAAAGATGACTGCACCTGTTGTTGACCTTGCAGATGAACAGAAGGATAATTTGCAACAATTGGCTTTTACTCGTGTTATTGATGCTTACCAGCAAATAGCAGTTGCAGGAGGATCGAAAGTTCGATTTTCAATACTTGTTTATCTAGGAGTTGAGCTTCCGTTGGACCTAGACCCATGGAAACTATTGCAAAAGCATGTCTTGGTTGATTACACAAGTCATGAGGGACACGAGTTGACTTTGCGTGTCCTATACAGGTTATTTGGTGAGGCTGAAGAGGAGCCTGATTTCTTTTCTTCTACAACAGCTGCTTCTGTATATGAAACATTCCTCCTAACAGTGGCAGAAGCACTAAGAGATTCTTTTCCACCTTCTGATAAGTCCTTCAGTAGATTGCTTGGTGAAGCTCCTTATTTGCCAAAGTCAGTTTTAAAAGTTTTAGAGAACATGTGTTCTCCTGGAAATTCGGATAAAGTTGAAAAGGAGTCACAGAGTGGGGATAGAGTTACCCAAGGCCTCAGTGCTGTATGGAGTCTGATTCTGCTGAGACCTCCTATTCGAGATACCTGCCTGAAAATTGCTCTTCAGAGTGCAGTGCATCAATTGGAGGAAGTGCGGATGAAGGCAATACGTCTGGTGGCAAATAAGCTTCATCCTTTAACATCCATTTCTCATCAAATAGAAGATTTTGCAAAGGAAATGCTGTTATCAGTGATGAGTGGTGATGCATCTGAAACTGCTGATGGTGAAGGATCTATTGCTGAAACCCCAAAGGGACCTGATAATGAAAAGTCTTCCAATGAACCATCATCAGTGAGTGGCAACAGTAAGGATGTCTGCTCTGATAATCACCAGTCATGTTCATCTGAAAGTGTCTCACTGATTTCTGTCTCTGAGGCTCAGCGATGCATGTCATTGTATTTTGCTCTGTGTACCAAGAAACATTCTCTCTTTCGGCAAATATTTGTCATCTATAAAAGCACATCAAAGGCAGTCAAGCAGGCAGTTCATCGTCATATCCCTATACTAGTTCGTACTATGGGCTCATCTCCAGATCTCCTTGAAATTATTTCAGATCCCCCACATGGAAGTGAGAACCTCCTAATGCAGGTGTTGCACACACTTACTGATGGGACAGTCCCTTCGAATGATTTAGTAGTTACTGTCAAAAGATTACATGATTCAAAAGTTAAGGATGCGGAGATTCTTATTCCTGTATTGGCACATCTGCCAAAAGATGAGGTTATGCTGGTCTTTCCTCACATTGTAAATCTTCCTCTGGATAAGTTCCAAGTTGCACTTGCTCGCATTTTACAGAAATCATCAAATTCTGGTCCCGTGCTTACTCCAGCCGAAGTATTAATAGCTATTCATGGAATTGATCCTGAAAGGGATGGAATTCCCTTAAAAAAGGTCACAGATGCATGCAATGCTTGCTTTGAGCAGCGGCAGATTTTCACTCAAGAAGTTCTCGCCAAAGTTCTAAATCAATTGGTTGAGCAAATCCCTCTTCCTTTATTGTTCATGCGGACAGTATTGCAAGCTATTGGTGCTTTTCCGACACTGGTGGACTTTATAATGGGTATTCTCTCTCGTCTTGTGGGAAAGCAGATATGGAAATACCCGAAGTTGTGGGTGGGATTCTTGAAGTGTGCACAATTGACACAACCTCGGTCATTCGGTGTTTTGCTTCAGCTACCTCCAGCACAACTGGAAAATGCTTTGAACAGATCTGCAGCACTTAAGGCACCATTGGTTGCTCATGCTAGTCAGCCAGATATCCAATCTTCACTACCCAGGTCAGTGTTGGTTGTTCTGGGAATTGCGTCAGATCCTCAGGTTCCAAGTCTGCCACAAACTAGTCAAACACAGATAAGTGAGACAGGCAACTCCGACAAGGATACAGCAACAGAAAAATCCAAAGAATCTTCTACAGCAAGCTGA 3984 0.4307 MVGKIGATSREKLASLVNSVKLAMDIPSKLDYLRQLKLELPQEDPVLLTEFLPCLFDFQSDRFSPVRKFVTEMLGEIGSNNTEFLPDIIPVLLAVLDDDTPAVVRQAISCGVNLFHSTLGKIAIQGLYSSDLDSALESAWAWMVKFKDKVYSLAFQHGSGGTKLLALKFVGAVILLYTPDPNGSSEAPPHQGGIREFNVSWIRKGHPVLNFKDLSIDASRSLGLLLDQLRFPTVNSLSNSVTVVLINSLSAIAKDRPTFYGRILPVLLGLEPSSSVVNGICITAVHHAMKNAFLTCLKCTHPSAAPWRERLAGALEEMQSEGMADQVFHRVSEINGSIKKKKDDGLYIKQEKPAIPSFDSLHSNLGRKRSGSQDGSDLAEDDVPDKRVKTTTIVLEPKKELDGSTTVSQYSNATPPLSSKREVDNGPVQQLVAMFGALVAQGEKAVASLEILISSISSDLLAEVVMANMCNLPPNNPTAEGDDEPLHDISIIGSDSNAKYPPSFVDSVLSLSSAFPSIASLLDVNQSISNEKSQGEEENSATGVDGNVVHSGLNLSSENVMMSSDFPSSDAKIPGVESVSTPAPPDIHDAGNLESGIPGLESFGRSDTLSETVVALASSDIEEASQEQVTSFGQRSPLDTVPSISTDRSEEMSPIAAVIDVNSAVSSAATSDRSASRLVLPKMTAPVVDLADEQKDNLQQLAFTRVIDAYQQIAVAGGSKVRFSILVYLGVELPLDLDPWKLLQKHVLVDYTSHEGHELTLRVLYRLFGEAEEEPDFFSSTTAASVYETFLLTVAEALRDSFPPSDKSFSRLLGEAPYLPKSVLKVLENMCSPGNSDKVEKESQSGDRVTQGLSAVWSLILLRPPIRDTCLKIALQSAVHQLEEVRMKAIRLVANKLHPLTSISHQIEDFAKEMLLSVMSGDASETADGEGSIAETPKGPDNEKSSNEPSSVSGNSKDVCSDNHQSCSSESVSLISVSEAQRCMSLYFALCTKKHSLFRQIFVIYKSTSKAVKQAVHRHIPILVRTMGSSPDLLEIISDPPHGSENLLMQVLHTLTDGTVPSNDLVVTVKRLHDSKVKDAEILIPVLAHLPKDEVMLVFPHIVNLPLDKFQVALARILQKSSNSGPVLTPAEVLIAIHGIDPERDGIPLKKVTDACNACFEQRQIFTQEVLAKVLNQLVEQIPLPLLFMRTVLQAIGAFPTLVDFIMGILSRLVGKQIWKYPKLWVGFLKCAQLTQPRSFGVLLQLPPAQLENALNRSAALKAPLVAHASQPDIQSSLPRSVLVVLGIASDPQVPSLPQTSQTQISETGNSDKDTATEKSKESSTAS 1327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1310 1327 MobiDBLite consensus disorder prediction 402 423 - -
Lele37g1310 1327 MobiDBLite consensus disorder prediction 923 960 - -
Lele37g1310 1327 Pfam Symplekin tight junction protein C terminal 1079 1257 IPR022075 -
Lele37g1310 1327 Gene3D - 3 344 IPR011989 -
Lele37g1310 1327 MobiDBLite consensus disorder prediction 1293 1311 - -
Lele37g1310 1327 MobiDBLite consensus disorder prediction 1292 1327 - -
Lele37g1310 1327 MobiDBLite consensus disorder prediction 627 649 - -
Lele37g1310 1327 Pfam Symplekin/PTA1 N-terminal 101 319 IPR032460 -
Lele37g1310 1327 MobiDBLite consensus disorder prediction 939 960 - -
Lele37g1310 1327 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1317 - -
Lele37g1310 1327 SUPERFAMILY ARM repeat 43 271 IPR016024 -
Lele37g1310 1327 MobiDBLite consensus disorder prediction 358 385 - -
Lele37g1310 1327 ProSiteProfiles HEAT repeat profile. 88 127 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1310 Lele-ChrLele37 22176136 22189075 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1310 37 22176136 22189075 Lele39g0101 39 681991 698553 hybridization
Lele37g1310 37 22176136 22189075 Lele40g1145 40 21518048 21522076 hybridization