Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1309 ATGGCTACAACAGCCACGATGATAAGAGCCACAAGGTTTCAAGTGATCAATGCGACGTCGTCTTCTTCTTCCAGCGGCGGAAGGAAGCTGATAGAGTCAGGCACGGTGAGGGCGATACAGCCAAGGGAAGCTTACAAGGCGATGAGCACAGAGGGGTTTGTGCTGCTAGACGTGAGGCCAGTGTGGGAGAGGGAGAAGGCACATGCGCAGGAATCAGTGCACGTGCCAATATTTGTGGAAGACAAGGATGGAAGTGTTGTGACTCTGTTGAAGAAGTGGGTTCACTTTGGTTATATTGGATTGTGGACAGGTCAATACTTAACTACTATCAACGCAGACTTCCTTGCTCAAGTGGAAATGGCCGTTCCTAGCAAAGACACCAACGTTCTTGTGGCTTGTGGTGAAGGTCTCAGGTCAATGATAGCATTGTCAAAGATGTATGAAGGAAGTTATAGAAATCTGGGATGGCTAGTTGGAGGGTTTAATCGTTCTAAAGATGAAGACTTCCCAGAAGTAGAAGGACAAGAAAAGTTGCAGTACGCTACTATAGGAGGAGTCTCCTACTATTTTCTTCAGTTGCTCTTACTTCTACAATCTCTAAGTAAAGGATAA 612 0.4608 MATTATMIRATRFQVINATSSSSSSGGRKLIESGTVRAIQPREAYKAMSTEGFVLLDVRPVWEREKAHAQESVHVPIFVEDKDGSVVTLLKKWVHFGYIGLWTGQYLTTINADFLAQVEMAVPSKDTNVLVACGEGLRSMIALSKMYEGSYRNLGWLVGGFNRSKDEDFPEVEGQEKLQYATIGGVSYYFLQLLLLLQSLSKG 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1309 203 ProSiteProfiles Rhodanese domain profile. 49 173 IPR001763 -
Lele37g1309 203 CDD RHOD 43 162 - -
Lele37g1309 203 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 10 14 201 IPR044614 -
Lele37g1309 203 Pfam Rhodanese-like domain 41 163 IPR001763 -
Lele37g1309 203 Gene3D - 36 183 IPR036873 -
Lele37g1309 203 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 34 175 IPR036873 -
Lele37g1309 203 SMART rhod_4 39 170 IPR001763 -
Lele37g1309 203 FunFam Rhodanese-like domain-containing protein 10 36 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1309 Lele-ChrLele37 22172598 22173812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1309 12 189 Sulfurtransferasese or Rhodanese AT3G08920 57.865 2.15e-75 224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1309 37 22172598 22173812 Lele39g0102 39 701853 703038 hybridization