Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1304 ATGGGAACAGGAAGCTTTGTGTGGAGTTTTACAAAGAAATTTATCACATTTGGGCTCATTACTGTCACGGTAACAGATCGTTATGTGAGCATTGTTCCAGTTCGTGGTGGCTCTATGTCTCCCACATTTAATCCTAAAACCAGCTCTTTGACGGGAAATATTTCTGATGACTATGTCTTGGTTGAGAAATTTTGCCTTGGAAACTATAGATTTTCCCATGGTGATGTGGTGGTATTCCGCTCCCCCTTGAATCACAAGGAGACGCACATTAAGAGAATTGTTGCATTACCTGGTGAGTGGTTTGGTGCACATCGTAACTATGATGTGCTGAAGATTCCAGAAGGACACTGTTGGGTTGAGGGAGACAATGCTTCTTCCAGCCTGGATTCAAACTCATTTGGTCCTATTCCTCTGGGTTTAGTTCGAGGAAGGGTGACCCACGTTGTATGGCCTCCTCAAAGAATAGGTGCTGTGAAGAAGATCCCACCAGAAGGATTTCCTTCTTAA 507 0.4379 MGTGSFVWSFTKKFITFGLITVTVTDRYVSIVPVRGGSMSPTFNPKTSSLTGNISDDYVLVEKFCLGNYRFSHGDVVVFRSPLNHKETHIKRIVALPGEWFGAHRNYDVLKIPEGHCWVEGDNASSSLDSNSFGPIPLGLVRGRVTHVVWPPQRIGAVKKIPPEGFPS 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1304 168 CDD S26_SPase_I 30 145 IPR019533 GO:0004252|GO:0006465
Lele37g1304 168 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 1 161 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Lele37g1304 168 Pfam Signal peptidase, peptidase S26 109 150 IPR019533 GO:0004252|GO:0006465
Lele37g1304 168 Pfam Signal peptidase, peptidase S26 10 99 IPR019533 GO:0004252|GO:0006465
Lele37g1304 168 SUPERFAMILY LexA/Signal peptidase 30 158 IPR036286 -
Lele37g1304 168 Gene3D Umud Fragment, subunit A 25 161 - -
Lele37g1304 168 PRINTS Bacterial leader peptidase 1 (S26A) family signature 27 43 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele37g1304 168 PRINTS Bacterial leader peptidase 1 (S26A) family signature 112 131 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele37g1304 168 PRINTS Bacterial leader peptidase 1 (S26A) family signature 89 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele37g1304 168 FunFam Mitochondrial inner membrane protease subunit 25 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1304 Lele-ChrLele37 22129810 22130971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1304 39 162 MADS-box Gene Family AT1G29960 36.154 5.05e-19 76.3