Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1300 ATGAGAGACGAAAGAGTCCTTTTTACAACGCGAAACATTCCAAACGTCACAAACTCTGTGAACAATGGCGTTGACACCGACGACCGTGAACCGTTGTGGAAGAAGACCACCCTTAGTCTCGCCACCGACGGTTATGGTGGGGGTTGTTCCCGTGGCGATGATTGCAAATTTGCCTGTGTTTCGATATCAGAGAGGAAAGTTGATAAACAATTCATGCCGACGCTGGCTCAGCTCCTGAAGCATCCACTGACCGTTGTCGCATTCGTTCCCAGTGATGTTTCCTTGTTCTTCGCCGGAGCCATTGCGGGCGCTGCTGCAAAGACTGTCACTGCTCCTCTGGATCGTATCAAGATCCTTATGCAGACTCATGGAGTACGAGTAGGACAAGAAAGTGCTAAGAAGGCAATTGGTTTCATTGAGGCTATAACAGTTATAGCAAAGGAAGAAGGCATCAAGGGTTACTGGAAGGGAAACCTACCCCAGGTGATTCGGATCATACCTTATAGTGCTGTCCAGCTTTTTGCTTATGAAACCTATAAGAAAATATTCAGGGGAAAGAATGGTGAGCTCTCTGTTTTTGGAAGACTTGCTGCTGGTGCTTTTGCAGGCATGACATCCACTTTTATAACTTACCCATTAGATGTCTTGAGATTACGATTAGCAGTTGAGCCGGGTTATCGAACCATGACAGAGGTTGCTTTGGGCATGCTAAGAGATGAAGGATTTGCATCTTTCTATTATGGCTTGGGGCCTTCCCTAATTGCAATAGCTCCTTATATTGCTGTCAACTTTTGTGTTTTTGACTTATTAAAGAAGTCTTTGCCTGAAAAATATCAAAAGAGAACTGAAACCTCCCTACTAACAGCTGTGCTTTCGGCTTCTCTCGCCACAGTTACATGCTACCCTCTAGATACTGTGCGAAGACAGATGCAAATTAAGGGTACACCTTACAATACAGTTTTAGATGCTCTTACAGGTATCGTAGAACGAGATGGAATTATTGGCTTATACCGGGGCTTTGTTCCCAATGCCTTGAAAAACCTACCAAGCAGCAGCATAAGGCTTACCACATATGACATTGTCAAACGCCTAATTGCGGCAAGTGAGAAGCAGTTCCAAACAATCAGAGAGGAAAATCGCAAGAAACAAACAAATACCAAGACTCAATGA 1170 0.4444 MRDERVLFTTRNIPNVTNSVNNGVDTDDREPLWKKTTLSLATDGYGGGCSRGDDCKFACVSISERKVDKQFMPTLAQLLKHPLTVVAFVPSDVSLFFAGAIAGAAAKTVTAPLDRIKILMQTHGVRVGQESAKKAIGFIEAITVIAKEEGIKGYWKGNLPQVIRIIPYSAVQLFAYETYKKIFRGKNGELSVFGRLAAGAFAGMTSTFITYPLDVLRLRLAVEPGYRTMTEVALGMLRDEGFASFYYGLGPSLIAIAPYIAVNFCVFDLLKKSLPEKYQKRTETSLLTAVLSASLATVTCYPLDTVRRQMQIKGTPYNTVLDALTGIVERDGIIGLYRGFVPNALKNLPSSSIRLTTYDIVKRLIAASEKQFQTIREENRKKQTNTKTQ 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1300 389 SUPERFAMILY Mitochondrial carrier 93 360 IPR023395 -
Lele37g1300 389 PRINTS Mitochondrial carrier protein signature 157 177 IPR002067 GO:0055085
Lele37g1300 389 PRINTS Mitochondrial carrier protein signature 246 264 IPR002067 GO:0055085
Lele37g1300 389 PRINTS Mitochondrial carrier protein signature 95 108 IPR002067 GO:0055085
Lele37g1300 389 PRINTS Mitochondrial carrier protein signature 108 122 IPR002067 GO:0055085
Lele37g1300 389 PRINTS Mitochondrial carrier protein signature 289 311 IPR002067 GO:0055085
Lele37g1300 389 PRINTS Mitochondrial carrier protein signature 205 223 IPR002067 GO:0055085
Lele37g1300 389 Pfam Mitochondrial carrier protein 284 366 IPR018108 -
Lele37g1300 389 Pfam Mitochondrial carrier protein 95 186 IPR018108 -
Lele37g1300 389 Pfam Mitochondrial carrier protein 189 276 IPR018108 -
Lele37g1300 389 Gene3D Mitochondrial carrier domain 91 365 IPR023395 -
Lele37g1300 389 ProSiteProfiles Solute carrier (Solcar) repeat profile. 190 273 IPR018108 -
Lele37g1300 389 ProSiteProfiles Solute carrier (Solcar) repeat profile. 90 182 IPR018108 -
Lele37g1300 389 PANTHER SOLUTE CARRIER FAMILY 25 87 365 - -
Lele37g1300 389 FunFam Envelope ADP,ATP carrier protein 92 370 - -
Lele37g1300 389 ProSiteProfiles Solute carrier (Solcar) repeat profile. 280 364 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1300 Lele-ChrLele37 22110986 22115686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1300 1 382 Organic Solute Cotransporters AT3G51870 65.365 0.0 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lele37g1300 Mito_carr 2.7e-25 No_clan