Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1299 ATGGGATTGGAGCAATTGAGTCTGAACGATACAAAGGGCAAGATCATTACATGCAGAGCTGCGGTTGCTCATGGAGCTGGAGAACCGTTCGTGATAGAACAAGTTAAAGTTCATCCTCCTCAGAAAATGGAAGTCCGAATCAAGATCCTCTTCACTTCTATCTGCCACACAGATCTCACAGCCTGGCTCGGCCATAATGAAGCTCAAAGGGCTTATCCGAGGATTTTTGGCCATGAAGCATGCGGGATAGTGGAGAGCGTAGGGGAAGGAGTAAAGGATGTGAAAGATGGAGATTATGTGGTTCCCATTTTCAACGGCGAGTGTGGCGACTGCAAGTTGTGCAAGTGTGAGCATACCAATATGTGCCAAAACTTCGGAGTCAACCCCATGAAGAAGGACATGGTGGCCGACGGCGCCACCAGGTTCACCACCGTCGACGGTAGCAGCCCCATCTACCATTTCCTCAACACCTCCACCTTCACCGAGTACACCGTCGTGGACTCCGCTTGTGTCGTCAAGCTCACCGGCTTCGTCGATCAAAATAGCCTGAAAAAGATCTCCTTGCTAAGCTGCGGTGTTTCCACGGGTGTAGGAGCTGCATGGAACACAGCCAACGTGCAATCTGATGCCTCTGTTGCTGTCTTCGGTTTGGGAGCCGTGGGCCTCGCTGTGGCCGCAGGAGCTCGTGCCAGAGGGGCATCCAAAATAATCGGCATAGACATCAACCCCGACAAATTCATCAGAGCCCGGGAGATGGGAGTGACGGATTTCATAAATCCAGGGGATGAAGAGAAGCCTGTTTACGAGAGAATAAGAGAAATGACTGAAGGAGGAACAGACTATAGCTTTGAATGTGTAGGAAACTCTGAGGTCCTTCGAAATGCCTTCTTGTCTGTTCATGAGGGATGGGGATTGACAGTGATATTGGGAATTCATGCAACACCACAAATGCTTCCAATTCATCCAATGGAGCTGTTTGATGGTCGCAGAATTGTTGCTTCAGTCTTTGGAGGCTTCAAGGGGAGGACCCACCTCCCTCCTTTTGCCAAACAATGCTTGCAAGGAGTGGTGAAGTTGGACGAGTTCATTACTCACGAGCTTCCTTTTGATGAGATTAACAAAGCCTTTGATCTTTTGGTCTCTGGAAAGTCACTGAGATGTCTCCTTCACCTGTGA 1176 0.4949 MGLEQLSLNDTKGKIITCRAAVAHGAGEPFVIEQVKVHPPQKMEVRIKILFTSICHTDLTAWLGHNEAQRAYPRIFGHEACGIVESVGEGVKDVKDGDYVVPIFNGECGDCKLCKCEHTNMCQNFGVNPMKKDMVADGATRFTTVDGSSPIYHFLNTSTFTEYTVVDSACVVKLTGFVDQNSLKKISLLSCGVSTGVGAAWNTANVQSDASVAVFGLGAVGLAVAAGARARGASKIIGIDINPDKFIRAREMGVTDFINPGDEEKPVYERIREMTEGGTDYSFECVGNSEVLRNAFLSVHEGWGLTVILGIHATPQMLPIHPMELFDGRRIVASVFGGFKGRTHLPPFAKQCLQGVVKLDEFITHELPFDEINKAFDLLVSGKSLRCLLHL 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1299 391 Pfam Alcohol dehydrogenase GroES-like domain 44 173 IPR013154 -
Lele37g1299 391 Gene3D - 196 334 - -
Lele37g1299 391 Gene3D - 22 387 - -
Lele37g1299 391 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 183 355 IPR036291 -
Lele37g1299 391 FunFam S-(hydroxymethyl)glutathione dehydrogenase 196 334 - -
Lele37g1299 391 SUPERFAMILY GroES-like 11 205 IPR011032 -
Lele37g1299 391 SUPERFAMILY GroES-like 340 390 IPR011032 -
Lele37g1299 391 Pfam Zinc-binding dehydrogenase 219 338 IPR013149 -
Lele37g1299 391 PANTHER ALCOHOL DEHYDROGENASE 13 388 - -
Lele37g1299 391 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 77 91 IPR002328 GO:0008270|GO:0016491
Lele37g1299 391 FunFam Alcohol dehydrogenase 6 21 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1299 Lele-ChrLele37 22105677 22110160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1299 44 380 Monolignol Biosynthesis Gene Families AT2G21890 27.066 2.50e-12 65.9