Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1297 ATGAAGAGTGGCAAAGGGAAGGGAGCAGTAAAGAACTCTAAGGAATCACTGAAGCCTGTCCATGACAGAAAGGTCGGAAAGCGAAAGGCTGCGGCTAAACCCGACAAAAGTAGTAAACGGCAAGCCAAGGCCAAGAAAGATCCCAACAAACCAAAAAGACCGCCCAGTGCTTTCTTTGTTTTCCTTGAGGAGTTCAGAGCAACCTTTAAGAAAGAAAATCCTAATGTGAAGGCAGTCTCAGCCGTTGGGAAAGCTGGAGGAGAGAAATGGAAATCCATGTCTGAGGCTGAGAAAGCTCCATATGAAGCCAAGGCTGCGAAAAGGAAAGCTGAGTATGAAAAACTTATGAATGCTTATAATAAAAAGCAGGCAAGCACAGCGGATGATGGAGGTGATGAATCAGACAGGTCCAAATCTGAAGTTCATGATGAAGATGAAGAGGAGGCACACCAAGAAGAAGAGGAGGATGATGAAGAAGAAGAAGACGAGGAGGAGGAGGATGACTGA 507 0.4556 MKSGKGKGAVKNSKESLKPVHDRKVGKRKAAAKPDKSSKRQAKAKKDPNKPKRPPSAFFVFLEEFRATFKKENPNVKAVSAVGKAGGEKWKSMSEAEKAPYEAKAAKRKAEYEKLMNAYNKKQASTADDGGDESDRSKSEVHDEDEEEAHQEEEEDDEEEEDEEEEDD 168
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1297 168 MobiDBLite consensus disorder prediction 146 168 - -
Lele37g1297 168 Coils Coil 141 167 - -
Lele37g1297 168 Coils Coil 102 122 - -
Lele37g1297 168 MobiDBLite consensus disorder prediction 1 55 - -
Lele37g1297 168 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 51 120 IPR009071 -
Lele37g1297 168 Pfam HMG (high mobility group) box 51 120 IPR009071 -
Lele37g1297 168 SUPERFAMILY HMG-box 37 121 IPR036910 -
Lele37g1297 168 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 2 154 IPR031061 -
Lele37g1297 168 MobiDBLite consensus disorder prediction 126 145 - -
Lele37g1297 168 MobiDBLite consensus disorder prediction 8 52 - -
Lele37g1297 168 MobiDBLite consensus disorder prediction 83 168 - -
Lele37g1297 168 CDD HMGB-UBF_HMG-box 51 116 - -
Lele37g1297 168 Gene3D High mobility group box domain 34 135 IPR036910 -
Lele37g1297 168 MobiDBLite consensus disorder prediction 90 116 - -
Lele37g1297 168 SMART hmgende2 50 121 IPR009071 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele37g1297 Lele-ChrLele37 22089193 22090796 Dispersed/Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Lele37g1297 HMG_box 1.2e-24 CL0114