Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1292 ATGGGAACAGGAAGCTTTGTGTGGAGTTTTACAAAGAAATTTAGCACATTTGGGCTCATTACTGTCACGGTAACATTATATGACTATGTCTTGGTTGAGAAATTTTGCCTTGGAAACTATAGGTTTTCCCATGGTGATGTGGTGGAGACGCACATTAAGAGAATTGTTGCATTACCTGTTGAGTGGTTTGGTGCACATCGTAACTATGATGTGCTGAAGATTCCAGAAGGACACTGTTGGGTTGAGGGAGATAATGCAGCTTCCAGCCTGGATTCAAACTCATTTGGTCCTATTCCTCTGGGTTTAGTTCGAGGAAGGGTGACCCACGTTGTATGGCCTCCTCAAAGAATAGGTGCTGTGAAGAAGATCCCACCAGAAGGATTTCCTTCTTAA 393 0.4326 MGTGSFVWSFTKKFSTFGLITVTVTLYDYVLVEKFCLGNYRFSHGDVVETHIKRIVALPVEWFGAHRNYDVLKIPEGHCWVEGDNAASSLDSNSFGPIPLGLVRGRVTHVVWPPQRIGAVKKIPPEGFPS 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1292 130 Pfam Signal peptidase, peptidase S26 71 112 IPR019533 GO:0004252|GO:0006465
Lele37g1292 130 SUPERFAMILY LexA/Signal peptidase 27 120 IPR036286 -
Lele37g1292 130 Gene3D Umud Fragment, subunit A 20 123 - -
Lele37g1292 130 CDD S26_SPase_I 28 107 IPR019533 GO:0004252|GO:0006465
Lele37g1292 130 PRINTS Bacterial leader peptidase 1 (S26A) family signature 74 93 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele37g1292 130 PRINTS Bacterial leader peptidase 1 (S26A) family signature 51 63 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele37g1292 130 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 28 123 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1292 Lele-ChrLele37 22069262 22070383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1292 22 124 MADS-box Gene Family AT1G29960 31.405 5.49e-11 54.3