Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1271 ATGCCTTCTTCTTCTACAACCATTATCTCCAAATGCACTATCTACCCAGATCAGAAATCCCCTCTTAAGACTCTCAAGCTTTCTGTCTCTGACCTTCCTATGCTCTCTTGCCATTACATTCAGAAGGGTGTTCTGCTTCCCCTCCCTCCTTACTCCTTCGATGATCTCATCGCCTTCCTCAAACACTCGCTCTCTCTCACTCTTTCCCATTTCCCCGCCCTCGCCGGCCGCCTCATCACTGATGATCTAGGCTATGTCCACATCCTCTGCAATGATGCCGGCGTGGATTTTGTTCAGGCCAGGGCTAAACACCTCCTTATCGACGCAATTTACTCCCCTGAACTTGTGGATGTGCCCAATTGCTTTAAGGAATTTTTTGTCTACGACAACACCATCTCTTATTCCGGCCACCACAACCCACTCGCAGCCGTCCAGGTCACCGAGCTCGCCGATGGGGTGTTCATAGGATGCACCGTGAATCACTCCGTCACCGACGGGACTTCCTTCTGGCACTTCTTCAATACCTTCGCCGAGATCTGTAAGGGCGTGAAGAAGATATCGAGGTCGCCGGATTTCACCCGCGACACCGTTTTCAACTCTCCCGCCGTGCTGAGGGTACCCGAAGGCGGCCCGAAGCTAACCTTCGACACCGACCAGCCCCTCCGGGAGAGAGTTTTCCACTTCAGCAGGGAGGCAATTCAGAAGCTGAAGCTCAGAGCCAACAATGGCGGCCGTAACGGTTTCGCGGATTCTACGGAGGTAATGGGGAAGCAGGTTAACGACAGTTGGAAAACCGTTAACGACGTCACTAACAACGCCGTACCAGCGAGGACCGGAGAGATCTCATCTTTCCAATCCTTATCTGCTCAACTGTGGCGTTCCGTGACACGTGCGAGGAAGCTGGACCCGTCCAAAACGTCGACGTTTCGTATGGCGGTGAATTGTCGCCACCGTCTGAAGCCCAAGATGGACGCTTACTACTTCGGCAACGCGATTCAGAGCATCCCAACCGTCGCTGAAGTCGGCGAGATCCTGTCTCTCGATCTGCAATGGTGCGCGAATCTCCTCCATCAGAACGTCGTCGTACATGACGATGCCAAGGTGCGCCGCGGCATAGAGGATTGGGAGAACGCTCCAAGGCTGTTTCCGCTGGGGAACTTCGATGGCGCATCCATCACGATGGGCAGCTCTCCTCGTTTTCCGATGTACGACAACGATTTCGGATGGGGGCGACCGTTGGCGGTGAGAAGCGGGAAGGCGAACAAATTTGACGGGAAGATCTCCGCGTTTCCGGGAAGAGAAGGGAACGGAAGTGTTGATCTGGAAGTCGTTTTGGCTCCAGAGACCATGGCGGGAATCGAAAACGACACGGAGTTTATGCAGTACGTATCGCAGGTCGTGTAA 1404 0.5399 MPSSSTTIISKCTIYPDQKSPLKTLKLSVSDLPMLSCHYIQKGVLLPLPPYSFDDLIAFLKHSLSLTLSHFPALAGRLITDDLGYVHILCNDAGVDFVQARAKHLLIDAIYSPELVDVPNCFKEFFVYDNTISYSGHHNPLAAVQVTELADGVFIGCTVNHSVTDGTSFWHFFNTFAEICKGVKKISRSPDFTRDTVFNSPAVLRVPEGGPKLTFDTDQPLRERVFHFSREAIQKLKLRANNGGRNGFADSTEVMGKQVNDSWKTVNDVTNNAVPARTGEISSFQSLSAQLWRSVTRARKLDPSKTSTFRMAVNCRHRLKPKMDAYYFGNAIQSIPTVAEVGEILSLDLQWCANLLHQNVVVHDDAKVRRGIEDWENAPRLFPLGNFDGASITMGSSPRFPMYDNDFGWGRPLAVRSGKANKFDGKISAFPGREGNGSVDLEVVLAPETMAGIENDTEFMQYVSQVV 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1271 467 Gene3D - 6 206 IPR023213 -
Lele37g1271 467 Gene3D - 208 455 IPR023213 -
Lele37g1271 467 SUPERFAMILY CoA-dependent acyltransferases 58 182 - -
Lele37g1271 467 Pfam Transferase family 6 460 - -
Lele37g1271 467 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1271 Lele-ChrLele37 21927531 21928934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1271 60 455 Monolignol Biosynthesis Gene Families AT5G48930 26.866 2.78e-34 131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1271 37 21927531 21928934 Lele39g0140 39 910783 914181 hybridization
Lele37g1271 37 21927531 21928934 Lele40g1109 40 21255995 21257419 hybridization