Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1270 ATGGAACACAGGGGAAGAAGACGACAGCCCCTCCTCTGTGCTCAGTCTGTAATATGCTCTGTTATTGGCCCCAAAGGAATCAAATATTTTGCTTTCGGCATATCATTGAGGCAACTGGCAAAATTGAATCCAAAATTTCCAAAAATGGATCTAGAGAGGTTTAGGTTTTATGCTTCCCCCATTGATCTTTGGATTTGGGAATTTTTTCCTTGGGTTTTGGAAACAAAGCCTGTTCTAGATTCCTCAGAGTCCATTTCTCTAGCATCTGCTTTGGCATGCTTTCTTGCTGCTGCTGTGTACAATATATCTAGAACAATGAACAGGGGAATTGAAGCACTCTCTCCGGCCTCCTACCTCCAGAACTCTAAGTGGCTGTTCCAGGAAGGCAAAGGAACTAGATGGACTGCAGAAGAGAACAAGCGATTTGAGAACGCTTTGGCTCTGTATGATAAGGATACACCAGATCGTTGGCTGAAGGTTGCTGCCATGATCCCGGGCAAGACTGTGGGTGATGTGATCAAACAGTACAGAGAACTGGAAGAAGATGTGAGTGTCATTGAGGCAGGGCTCTTCCCAATCCCTGGTTACAGTAATAGTTCTTTCACATTGGAGGGGGTCAATGGCCAAGGTTTTGATGGCTTCAACCAATTTTATACTTCTGGTGGTAAAAGGGGTTCCCCAACCAGGCCTTCTGACCATGAAAGGAAGAAAGGAGTTCCTTGGACTGAAGAGGAGCACAGGCAATTTCTGATGGGGTTGAAGAAATATGGAAAAGGGGACTGGAGAAACATCTCTCGCAATTTTGTGACCACAAGGACGCCTACTCAGGTTGCAAGCCATGCTCAGAAGTATTTCATCAGGCAGCTTACAGGAGGGAAAGATAAGAGGAGATCCAGTATCCATGATATCACGATGGTCAATCTCCAAGAAACCAAACCTCCTTCATCAGACAGTATCAGATCTGCTTCTTCAAATCATCCTACAAAGGTTGTAAATCCACATCAGAATCAGAAATTAGTCAGCATGATTAAACAGGAATATGACATGCCAACGGTTTTCAATCCTACAAATGGGAACATGTTCTTGGCACCGATTTATGGATTTTCTTCTCATGGATCGAAACCCCTGCAGGAGCAGTGTATGCTCAGAGGTACTCTCCATGGATTTGATCATGGACCTTATGATACTATTCTTCAAATGCAATCAATGCAGCATCAGTGA 1221 0.4406 MEHRGRRRQPLLCAQSVICSVIGPKGIKYFAFGISLRQLAKLNPKFPKMDLERFRFYASPIDLWIWEFFPWVLETKPVLDSSESISLASALACFLAAAVYNISRTMNRGIEALSPASYLQNSKWLFQEGKGTRWTAEENKRFENALALYDKDTPDRWLKVAAMIPGKTVGDVIKQYRELEEDVSVIEAGLFPIPGYSNSSFTLEGVNGQGFDGFNQFYTSGGKRGSPTRPSDHERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGKDKRRSSIHDITMVNLQETKPPSSDSIRSASSNHPTKVVNPHQNQKLVSMIKQEYDMPTVFNPTNGNMFLAPIYGFSSHGSKPLQEQCMLRGTLHGFDHGPYDTILQMQSMQHQ 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1270 406 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 128 348 IPR043363 -
Lele37g1270 406 CDD SANT 240 285 IPR001005 -
Lele37g1270 406 FunFam transcription factor MYB1R1 239 290 - -
Lele37g1270 406 Gene3D - 239 289 - -
Lele37g1270 406 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 233 289 IPR017930 -
Lele37g1270 406 Pfam Myb-like DNA-binding domain 240 285 IPR001005 -
Lele37g1270 406 Pfam Myb-like DNA-binding domain 133 178 IPR001005 -
Lele37g1270 406 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 236 288 IPR006447 GO:0003677
Lele37g1270 406 Gene3D - 126 193 - -
Lele37g1270 406 MobiDBLite consensus disorder prediction 227 241 - -
Lele37g1270 406 SMART sant 237 287 IPR001005 -
Lele37g1270 406 SMART sant 130 182 IPR001005 -
Lele37g1270 406 SUPERFAMILY Homeodomain-like 235 288 IPR009057 -
Lele37g1270 406 ProSiteProfiles SANT domain profile. 132 184 IPR017884 -
Lele37g1270 406 MobiDBLite consensus disorder prediction 310 332 - -
Lele37g1270 406 CDD SANT 133 179 IPR001005 -
Lele37g1270 406 ProSiteProfiles SANT domain profile. 241 289 IPR017884 -
Lele37g1270 406 SUPERFAMILY Homeodomain-like 132 187 IPR009057 -
Lele37g1270 406 FunFam Transcription factor SRM1 126 193 - -
Lele37g1270 406 ProSiteProfiles Myb-like domain profile. 233 285 IPR001005 -
Lele37g1270 406 MobiDBLite consensus disorder prediction 219 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1270 Lele-ChrLele37 21902485 21905179 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele37g1270 Myb_DNA-binding 3.5e-12 CL0123