LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele37g1215	ATGGAAGCCGCTTCTATAACGCATTTGTTGAAAAGCCTTTTTGATTATACTCATTGGAATTATGCTGTGTTTTGGAAGCTTAATCACTATCTTCCAATGACCTTGACTTGGGAAGATGGATACTATCGTTGCCAAACAGCAAATGGGGCCGTAGAAAGCATTAGCAGTGACGTTAATTTTGAAGCCTCAGATTCTGTCTTTCTACAAGTAATGAAAGCGCTGGTGATTCTGGAGCTTGTTCTGATTGTTGGAGAAATAGCTCTTAAAGGGGTTCTTTGTTGGGTTTTATCTGAGGATGTCTTTACAAGTAATTTCAACGCTAACATAATATCTGAGTGCCCTTATGAATGGCTTCTTCAATTTGCATCTGGCATAAAGACTATCGTGCTTGTACCCGTTCTTCCTCATGGAGTTTTGCAATTTGGTTCATTTGAAGCGGTGGATGAAAAATCTGACAATTCTTTCCTTAATTCCCTTATTTGTGCATTTCTCTGCCTCTCTGAGTATGCATGTCTGCCTAGAGCTGGAATGGTTGCCGAGGACCCAGTATTCCTTGCCAATGTCAAGGTGAAATTCGATTCCATGTGTTGTGAGATGTCAAATACTACATTCTTGAGCTTAGATGTTGATATTCAAGCACCATTATTCTCATCCTTAACAGATTGTCCTATGGATAACTTGGATGAAGCGTCTTCTTTTTCTAACAATAAAAGGAAAGATAAACTTTATGGTAGCACATCATCAGTGTTGATGGATCAACAAGGTTGCACTGATACTGATCATAAAAATTGCGATGATGTACACGATTTATCTGATATTTCCTTGCATCTTGATTCATATAAAGCACTTGGACCGACTGCTGAATGTCTGTGGAAATATTTTTCTGTTGAGCATACATGCGGTAGCTCCACTTTGATGTTGGATGGGAAAGGGCAAGATTATGTTAAAGATTTACAGTTTCTCAGTGAAGATAATTCAGAATATCTTTTGGATGCTGTTGTGGGAAGCAGTTTAGAGAGTGCCTTGGATGACTCTTCATTGAGTGTAGCCAATGATGTTAAGCCTCCTGTAACATTGCCAAGAGAATGTACTGCTTCCATTCATCCACAAAGTCATCCCGAAGAAAGCGCTTCGATAGTGAATTATTCAGATCACGAAAATCGTGCCACGCCAGAGTTTATGGCTAAGTGCAAGGACGATTTTAGTAACCTTGTTACATCAAGACCTTTAGATGGCAATTCAAGCATATTGATTGGTGAGATGGAGCAGGAGAAGGTTCATGGTTTTGTGCAGCCTAAAAGTGGACCGAAGCTTTCTAGCACCGGCAAGAAAAGAGCCAGAGTTGGGAACACGAAAAAGCCAAGACCTAGGATAGGATAG	1380	0.4007	MEAASITHLLKSLFDYTHWNYAVFWKLNHYLPMTLTWEDGYYRCQTANGAVESISSDVNFEASDSVFLQVMKALVILELVLIVGEIALKGVLCWVLSEDVFTSNFNANIISECPYEWLLQFASGIKTIVLVPVLPHGVLQFGSFEAVDEKSDNSFLNSLICAFLCLSEYACLPRAGMVAEDPVFLANVKVKFDSMCCEMSNTTFLSLDVDIQAPLFSSLTDCPMDNLDEASSFSNNKRKDKLYGSTSSVLMDQQGCTDTDHKNCDDVHDLSDISLHLDSYKALGPTAECLWKYFSVEHTCGSSTLMLDGKGQDYVKDLQFLSEDNSEYLLDAVVGSSLESALDDSSLSVANDVKPPVTLPRECTASIHPQSHPEESASIVNYSDHENRATPEFMAKCKDDFSNLVTSRPLDGNSSILIGEMEQEKVHGFVQPKSGPKLSSTGKKRARVGNTKKPRPRIG	459

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele37g1215	459	MobiDBLite	consensus disorder prediction	427	459	-	-
	Lele37g1215	459	Pfam	bHLH-MYC and R2R3-MYB transcription factors N-terminal	8	151	IPR025610	-
	Lele37g1215	459	PANTHER	TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED	211	457	IPR043561	GO:0003700\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele37g1215	Lele-ChrLele37	21475532	21478580	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele37g1215	10	175	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT2G27230	29.825	2.60e-15	76.6