Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1208 ATGCCCATCATCTTCAAGCTCCTCGTGATGCTGCTTTTGCCAGTGACAGTATTTGCAACTACGGAAGATAGAAGCTTCATCTACAATGGCTTCCACTCAGCTAACTTAACCGTTGACGGCGTTTCTTCCCTCAGCTCCGACGGCCTTCTCCGACTTACCAACGGCACCAAGCAACAAAAAGGTCACGCCTTTTACTCTAAGCCTATAGCTTTCGTCAAAAACTCGTCTTTCTCTACCTCTTTCGTTTTCGCCATTAGATCTGAATACCCAACTCTGAGTGGTCATGGAATAGCTTTCGTAATTTCTTCAACAAAAACACTCCCTGGTGCTCTGCCCAGTCAGTTCCTTGGCCTCTTCAATGAAACTAACAATGGCCACCCGACAAACCATGTACTCGCAGTAGAACTTGACACCATTCAGAACATCGAGTTCGAGGATATCAACGATAACCATGTCGGAATCGACATTAATGGCTTGAATTCAGTGAAATCTGCTCCGGCTGGATATTATGTTGATGGGTTTCAGTTTCAGAACTTGAGCCTTTTCAGTGGCCTTCCAATGCAGGTGTGGGTGGACTATGATGGAGGCAAGAATCAAATTAGTGTCACCTTAGCTCCAATCCACGTTAAAAAACCAGAAACTCCATTGTTAACGTTGTCCCATGATCTTTCCCGATTTCTAAGGAGGCCGAGTTATGTCGGATTCTCATCTTCCACTGGGTCAGTCTCAACTTCTCATTATGTTCTTGGTTGGAGCTTTAAGCTCAATGGGAAGGCTGAAAACCTCGCAATCAATGAACTCCCAAAGCTCCCTCAACTAGGCGATGGTAAAAACGAGCAATCTATGATTTTGCTTATTGGGATTCCTCTCGTTTCTCTCTGTTTAATTTTTCTGTTAAGTTTAGCTGTAGTTCAATTTATAAAGAGAAAAAAGAAGTTTTCTGAGTCGGTTGAAGATTGGGAGAAAGACTACGGTCCTCACAGGTTCAAATACAAGGATCTCTACATTGCCACAAAGGGATTCAGAGAAGAAGAGCTTCTGGGAAGTGGTGGATTTGGTAGAGTCTATAAAGGGATAATGCCAATTTCAAAAATTGAGGTTGCTGTGAAGAGAGTATCCCATGAATCTCGACAAGGTATGAGGGAATTTGTGGCAGAAATTGTAAGTATTGGTCGTCTTCGTCATCGAAACCTAGTACCTCTTTTAGGGTATTGCAGGCGTAAAGGAGAGCTTCTTTTAGTCTATGATTTCATGCCAAATGGAAGCTTAGATAAATACCTCTATAATCAACCTAGAGTGACATTGAATTGGACACAGAGATTTCGGATCATCAAAGGAGTAGCTTCAGGATTATGCTATTTGCATCAAGAATGGGAGCAAGTGGTTGTTCATAGAGACATAAAAGCCAGCAACATTCTTCTAGATTCAGAATTAAATGGAAGGTTAGGGGATTTTGGTCTTGCAAGATTATGTCCCCACGGCAGTGATCCTCAAACTACACATGTGGTGGGAACTCTTGGGTATCTCGCACCAGAGCAGACAAGAATAAGGAAGGCCACGACAAGCTCAGATGTTTTTGCTTTCGGTGCTTTCACGCTCGAGGTCGTGTGTGGAAGAAGGCCTATAGAGCAAGGAGGAGCTAGTGACGGCGTCGTTTTGGTGGATTGGGTTTATGGTTTCTTCAGTAGGGGTGAGATTGTTGAGGCAAAGGATCAGAATTTGCCTATGGGAAGAGAGTATAGGGAAGAGGAAGTAGAATTGGCATTAAAACTAGGGATTTTGTGTTCAAATTCTGAGCCATTAAGGAGGCCAAACATGCGACAAGTTGTGCAATATTTAAATGGGGATGTACCTTTGCCTGATTTGTCTTCACTAAGCTTATCATCTTCTGGTTTAACGTTTGGGCATCGTCAAGCAGAGATTCATCATGATTCAGCCGTGTCCTTCCTATCTTCCATGGATGGCTCACTTTCTCAGAGTTCTTCCGTAGCTGAATCTCTTTTATCTGGAGGTCGATGA 2019 0.4319 MPIIFKLLVMLLLPVTVFATTEDRSFIYNGFHSANLTVDGVSSLSSDGLLRLTNGTKQQKGHAFYSKPIAFVKNSSFSTSFVFAIRSEYPTLSGHGIAFVISSTKTLPGALPSQFLGLFNETNNGHPTNHVLAVELDTIQNIEFEDINDNHVGIDINGLNSVKSAPAGYYVDGFQFQNLSLFSGLPMQVWVDYDGGKNQISVTLAPIHVKKPETPLLTLSHDLSRFLRRPSYVGFSSSTGSVSTSHYVLGWSFKLNGKAENLAINELPKLPQLGDGKNEQSMILLIGIPLVSLCLIFLLSLAVVQFIKRKKKFSESVEDWEKDYGPHRFKYKDLYIATKGFREEELLGSGGFGRVYKGIMPISKIEVAVKRVSHESRQGMREFVAEIVSIGRLRHRNLVPLLGYCRRKGELLLVYDFMPNGSLDKYLYNQPRVTLNWTQRFRIIKGVASGLCYLHQEWEQVVVHRDIKASNILLDSELNGRLGDFGLARLCPHGSDPQTTHVVGTLGYLAPEQTRIRKATTSSDVFAFGAFTLEVVCGRRPIEQGGASDGVVLVDWVYGFFSRGEIVEAKDQNLPMGREYREEEVELALKLGILCSNSEPLRRPNMRQVVQYLNGDVPLPDLSSLSLSSSGLTFGHRQAEIHHDSAVSFLSSMDGSLSQSSSVAESLLSGGR 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1208 672 CDD lectin_legume_LecRK_Arcelin_ConA 25 257 IPR001220 GO:0030246
Lele37g1208 672 ProSitePatterns Protein kinases ATP-binding region signature. 347 370 IPR017441 GO:0005524
Lele37g1208 672 ProSiteProfiles Protein kinase domain profile. 341 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g1208 672 FunFam L-type lectin-domain containing receptor kinase S.4 418 626 - -
Lele37g1208 672 Pfam Protein kinase domain 341 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g1208 672 CDD STKc_IRAK 347 615 - -
Lele37g1208 672 SUPERFAMILY Protein kinase-like (PK-like) 323 622 IPR011009 -
Lele37g1208 672 Gene3D Phosphorylase Kinase; domain 1 326 417 - -
Lele37g1208 672 ProSitePatterns Legume lectins beta-chain signature. 132 138 IPR019825 -
Lele37g1208 672 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 272 IPR013320 -
Lele37g1208 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Lele37g1208 672 FunFam Lectin-domain containing receptor kinase A4.3 326 417 - -
Lele37g1208 672 Pfam Legume lectin domain 24 267 IPR001220 GO:0030246
Lele37g1208 672 SMART serkin_6 341 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g1208 672 Gene3D - 22 268 - -
Lele37g1208 672 Gene3D Transferase(Phosphotransferase) domain 1 418 626 - -
Lele37g1208 672 FunFam L-type lectin-domain containing receptor kinase V.9 23 260 - -
Lele37g1208 672 PANTHER - 31 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1208 Lele-ChrLele37 21422636 21424654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1208 19 672 Receptor kinase-like Gene Family AT2G37710 61.027 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele37g1208 Pkinase 7e-45 CL0016