Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1203 ATGGCGACGATGGTGGTGTTTATAATTTATACCATTGGTTGGAGCTTCAAGCTCAATGGGGATGCTCAAAACCTTGATGCCTCCCAACTCCCAAAGCTGCCACTAGTCGAAGGAAGAAGAAAACAATGCATGAGTCTGCCAGTTTGGTTATCCATGCTATCACTCTGTTTTCTTTTTCTTGTAAGTTCATGTATACTTTATTACATATATAGGAAAAGGAAGTTTTCTGAGGTTGTCGAAGAGTGGGAGCAAGAATATGGTCCTCACAGGTTCAAATACAGAGATCTCTATGTAGCCACAAAGGGATTCAAAGACAAAGAGCTTCTGGGAAGTGGTGGATTTGGTAGAGTCTACAAAGGAACAATGCCAGGTTCGAAAATTGAGGTTGCTGTGAAGAAAGTTTCACATGAATCTCAACAAGGCATGAGGGAATTTGTAGCAGAGATCGCTAGTATTGGTCATTTCCGCCACCGAAACCTCGTTGTGTGTGGAAGAAGGCCCATAGAGCAAGTAAATGAAGAAGAGAGTGTGATTTTAGTAGATTGGGTTTATGGGTTATGGAACAGGGGTGAGATTATTGAAGCAAAGGATCCAAATTTAGGAACAGAGTATTTAGCAGAAGAGGTAGAGTTAGTATTGAAACTAGGGCTTCTCTGTTCAAATTTGCAAGCACTGAGTCGACCAAGCATGCGCCAAGTTGTGCAGTATCTGAATGGGGAAGTTCCTTTGACGAACACATCATCATCTTTAAGATTATGTTCTACTTCCCAAGGGTTGTCATTTGGGAACCACCAAGCATTTTTGGACTCTACAACGTCGTCCATTCCATCTTTTGCTGACAAGTCTTTCTCTCAATCTTCAATAGCTGAATCACTTCTCTCTGGAGGTCGTTAA 894 0.4172 MATMVVFIIYTIGWSFKLNGDAQNLDASQLPKLPLVEGRRKQCMSLPVWLSMLSLCFLFLVSSCILYYIYRKRKFSEVVEEWEQEYGPHRFKYRDLYVATKGFKDKELLGSGGFGRVYKGTMPGSKIEVAVKKVSHESQQGMREFVAEIASIGHFRHRNLVVCGRRPIEQVNEEESVILVDWVYGLWNRGEIIEAKDPNLGTEYLAEEVELVLKLGLLCSNLQALSRPSMRQVVQYLNGEVPLTNTSSSLRLCSTSQGLSFGNHQAFLDSTTSSIPSFADKSFSQSSIAESLLSGGR 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1203 297 SUPERFAMILY Protein kinase-like (PK-like) 82 161 IPR011009 -
Lele37g1203 297 PANTHER - 161 242 - -
Lele37g1203 297 Gene3D Phosphorylase Kinase; domain 1 67 161 - -
Lele37g1203 297 ProSiteProfiles Protein kinase domain profile. 103 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g1203 297 ProSitePatterns Protein kinases ATP-binding region signature. 109 133 IPR017441 GO:0005524
Lele37g1203 297 Pfam Protein tyrosine and serine/threonine kinase 106 163 IPR001245 GO:0004672|GO:0006468
Lele37g1203 297 Gene3D Transferase(Phosphotransferase) domain 1 162 256 - -
Lele37g1203 297 SUPERFAMILY Protein kinase-like (PK-like) 162 256 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1203 Lele-ChrLele37 21393948 21395249 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1203 161 246 Receptor kinase-like Gene Family AT4G29050 40.449 8.78e-14 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele37g1203 PK_Tyr_Ser-Thr 3.9e-08 CL0016