Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1195 ATGGTTGACTTTTCAGCCATTTCAGAGTCAGTAATGATGGAGGAAGCAGTAATGGCGGCTTATTCGTCAGATGGGTCAGAAGAAGATGACCTCTTGAGAGAGCTTTTAGATCATAACTATCATTATGAGTCGTCTCCTTTCTTCGCCTCCTCCATTGATGAACCCATCAGCACAATAACATCAGCATCCACCCTTAACTCCTTCATCTCCAACATTTATTCAGGACCTACCATTTCTGATATTGAAAACGCCTTGTCGTTCACCAACCACAAACAACAGTCCCACCAAGACTTCTCCTTATCCAGGGTTTCGATACTGGAGAGAGGACTGAGCAAGATAGAGAATAAGTATACTCTGAAAATGAAGTGCTTTGGGAATGGCATGGGTGATGATGGATATAAGTGGAGGAAGTACGGTCAGAAATCCATTAAGAATAGTCCAAATCCTAGGAGCTACTACAGGTGCACTAATCCAAGGTGTAATGCCAAGAAGCAAGTGGAAAGATGCAATGGGGACCCAGACACTCTTATCATAACTTATGAAGGACTTCACCTTCACTTTGCTTATCCATATTTGTGGATGACCCAGGCCCATGAATCCCTTCCACAACCAAGTAAGAGGCCCAAGACCAATACGACATTTTCCAAGGCTCAAGCCCATCAAGGCCCACAAGCACTGGAACCTGATCAAGCCCAGGCCCATGGGGTTAGTGTGGGATCGCAAGGGTTGCTTGAAGACATGGTGCCTTGGATTATTAGAAATCCTTTTCAGTCTTAA 777 0.4453 MVDFSAISESVMMEEAVMAAYSSDGSEEDDLLRELLDHNYHYESSPFFASSIDEPISTITSASTLNSFISNIYSGPTISDIENALSFTNHKQQSHQDFSLSRVSILERGLSKIENKYTLKMKCFGNGMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCNAKKQVERCNGDPDTLIITYEGLHLHFAYPYLWMTQAHESLPQPSKRPKTNTTFSKAQAHQGPQALEPDQAQAHGVSVGSQGLLEDMVPWIIRNPFQS 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1195 258 SMART WRKY_cls 129 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele37g1195 258 MobiDBLite consensus disorder prediction 200 220 - -
Lele37g1195 258 Pfam WRKY DNA -binding domain 130 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele37g1195 258 ProSiteProfiles WRKY domain profile. 124 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele37g1195 258 MobiDBLite consensus disorder prediction 200 237 - -
Lele37g1195 258 SUPERFAMILY WRKY DNA-binding domain 127 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele37g1195 258 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 89 214 IPR044810 GO:0003700
Lele37g1195 258 Gene3D WRKY domain 125 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1195 Lele-ChrLele37 21354864 21357188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1195 66 192 WRKY Transcription Factor Family AT5G43290 60.465 4.04e-47 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele37g1195 WRKY 2.1e-25 CL0274