Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1181 ATGAAAATAACACAGTTGAAGGGGCTAGAGGCAAACAGAGTGAGAGACTTTTACCGGCGATTTCCTGTCCTGTCTCAGCGTTTAGGGCTTTTAAGCAGGGGCCATTTCGTTCTTCCCTGTTTCGCACAGCAGAGCCGTTATTCTGCTATTGCATTAAACCCCAGAAACCTTGACAGTAGGAATATTTCGTTTTCTTTCTTTTTCAAATCGATGATGGACAAGAGCATCTTTGGAGACTCGGATTCTCTTTCTGGAGAAGATAAGGAAAAAATGTCTGCCATGATCGATCAGCTTCAAACCCGAGACAGAACAATCATCTTTTCCGGTGCAGAAATTTGTACTGAGGAAGAACCAGTTTATTTATATTGGGTAAAACAGCAAGGAACAGATTTGGAAGATCTTTCTACGTTTTTCTTTTTGGCTACAAAGATCTTTCTACGTCTTGTTCCACTAAACTTCCCTCATGATATACAAATCTGGACTTTAATTCCCGCCACTCCTCTCCTAGCAGAGGAGAAGATGGCTGAGGTGGAATCGGAGGAGTATTGCCAGGAAAATAAACAAACTATTGCTGCTTCTAGCTCCTCTATATCTGAAAGCAGTGGCAGTGCTCTCCCCAAGTCTCCTGGAATATGTAGCCCAGCATCTACATCACCCTCTCATCGGAGAACTACTGGCCCTATAAGGCGTGCAAAGGGTGGTTGGACAGCAGAAGAGGATGAGACACTGAGGAATGCTGTTGCGATTTTCAAGGGAAAGAATTGGAAGAAAATAGCTGAGTTTTTCCCTGATAGATCAGAAGTGCAATGTCTTCACAGATGGCAAAAAGTTCTTAACCCAGAACTTGTTAAAGGGCCTTGGACTCAGGAGGAGGATGATAAAATTGTTGAACTAGTGTCAACATATGGGCCTACAAAATGGTCAGTAATAGCCAAGTCCCTGCCTGGTCGTATAGGGAAGCAGTGTCGAGAGCGATGGCACAACCATCTTAATCCTGACATAAAGAAGGATGCTTGGACTTTGCCAGAGGAATTAGCCCTCATGAATGCTCATTGTATACATGGGAACAAATGGGCTGAAATAGCTAAGGTCCTGCCTGGAAGGACTGATAATGCAATAAAGAACCACTGGAATAGTTCATTGAAGAAGAAGTTGGACTTTTATTTAACTACTGGACAACTTCCACCAGTTTCAAAGAATAGTCCAAAAGTTGATGTCGAAGACAAAATGATATGCTCTGCAACAGAAACAATTCTTGGTAGTTCAAATAAAGTATTAGATGCAGCTACTGAAACATCGTCAGAAACTACAGAGATTAATAAGCAAGATGACAGTGGTAAGAATCACTCAAGGCATTTAGCAACAGCAAGAGATGTTGGTGATTCTTCAAATGTCCTTGCAAATGAATCTGCTGATTCTGCCTGTATAGAGTGCAAGCCCAAATCCTCCAATTTAGATTTCAGCTGCAGCAACTCAGAACCAATATCAAGAGACAATTTTGAAATAAATGGTGAACGAACACATGAGAAATCTGGACTCAATGGCAAGCTAGCAACCGTGCATTGTATAAATAATGGTGAAATGAGTAGTAGCAGGTTGATCACAAAACCTTCTCCACAGGAAGGTCCAACTTGTGGTTCTTTATGTTATAAGCCACTGCAGATGGAGAATTTGGTTCCTTTAGATTCTCTTTATTTAAATATCTTTTGTCTCCAAAATGACTACAGCCCTACCCCCATGATATCTCCTGCTGGTTTCTTCACTCCACCTTGTGTGAAGGGGCGTGAATTTTTCAAACGAACTCCTGAATCAATATTGAAAATGGCTGCTGAGACTTACCCAAATACCCCTGCCATATTGAGGAAGAGAAGGACTGGAGTCCAGACACAAGTCACTCCCAGTAAAGTTGTGAAAGTTGATGGAGAATCTCATGCTTCTATTGGTCGGCAGAGAAATAAGAATTATACTGATTCTGAGGTTGGGAGGTTCTCTGAGAGTCCAGCAAGCCATGGCCATGGCAATGACCTTCCCAATAATAAAATTTTCAATGCATCTCCACCCTACCGGTTAAGATCCAAACGGACAACAGTTGTCAAGTCTGTGGAGAAACAACTTGAGCTTGCATTTGACCAAGAAAAGCACAACGGCATCAAGATGAAAATGGAAAAGTCTTCAATGTAG 2181 0.4186 MKITQLKGLEANRVRDFYRRFPVLSQRLGLLSRGHFVLPCFAQQSRYSAIALNPRNLDSRNISFSFFFKSMMDKSIFGDSDSLSGEDKEKMSAMIDQLQTRDRTIIFSGAEICTEEEPVYLYWVKQQGTDLEDLSTFFFLATKIFLRLVPLNFPHDIQIWTLIPATPLLAEEKMAEVESEEYCQENKQTIAASSSSISESSGSALPKSPGICSPASTSPSHRRTTGPIRRAKGGWTAEEDETLRNAVAIFKGKNWKKIAEFFPDRSEVQCLHRWQKVLNPELVKGPWTQEEDDKIVELVSTYGPTKWSVIAKSLPGRIGKQCRERWHNHLNPDIKKDAWTLPEELALMNAHCIHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLDFYLTTGQLPPVSKNSPKVDVEDKMICSATETILGSSNKVLDAATETSSETTEINKQDDSGKNHSRHLATARDVGDSSNVLANESADSACIECKPKSSNLDFSCSNSEPISRDNFEINGERTHEKSGLNGKLATVHCINNGEMSSSRLITKPSPQEGPTCGSLCYKPLQMENLVPLDSLYLNIFCLQNDYSPTPMISPAGFFTPPCVKGREFFKRTPESILKMAAETYPNTPAILRKRRTGVQTQVTPSKVVKVDGESHASIGRQRNKNYTDSEVGRFSESPASHGHGNDLPNNKIFNASPPYRLRSKRTTVVKSVEKQLELAFDQEKHNGIKMKMEKSSM 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1181 726 Gene3D - 337 410 - -
Lele37g1181 726 ProSiteProfiles Myb-like domain profile. 227 278 IPR001005 -
Lele37g1181 726 Pfam Myb-like DNA-binding domain 336 379 IPR001005 -
Lele37g1181 726 Pfam Myb-like DNA-binding domain 232 278 IPR001005 -
Lele37g1181 726 Pfam Myb-like DNA-binding domain 284 330 IPR001005 -
Lele37g1181 726 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 335 385 IPR017930 -
Lele37g1181 726 MobiDBLite consensus disorder prediction 429 461 - -
Lele37g1181 726 CDD SANT 235 278 IPR001005 -
Lele37g1181 726 ProSiteProfiles Myb-like domain profile. 279 330 IPR001005 -
Lele37g1181 726 FunFam Transcriptional activator Myb isoform A 284 336 - -
Lele37g1181 726 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 232 278 IPR017930 -
Lele37g1181 726 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 279 334 IPR017930 -
Lele37g1181 726 MobiDBLite consensus disorder prediction 193 229 - -
Lele37g1181 726 MobiDBLite consensus disorder prediction 639 687 - -
Lele37g1181 726 MobiDBLite consensus disorder prediction 193 224 - -
Lele37g1181 726 CDD SANT 338 381 IPR001005 -
Lele37g1181 726 PANTHER MYB PROTEIN-RELATED 232 317 - -
Lele37g1181 726 ProSiteProfiles Myb-like domain profile. 331 381 IPR001005 -
Lele37g1181 726 FunFam Transcription factor MYB3R-2 337 403 - -
Lele37g1181 726 SMART sant 283 332 IPR001005 -
Lele37g1181 726 SMART sant 231 280 IPR001005 -
Lele37g1181 726 SMART sant 335 383 IPR001005 -
Lele37g1181 726 Gene3D - 284 335 - -
Lele37g1181 726 MobiDBLite consensus disorder prediction 648 663 - -
Lele37g1181 726 Gene3D - 231 283 - -
Lele37g1181 726 CDD SANT 286 330 IPR001005 -
Lele37g1181 726 SUPERFAMILY Homeodomain-like 281 377 IPR009057 -
Lele37g1181 726 FunFam Transcriptional activator Myb isoform A 231 283 - -
Lele37g1181 726 MobiDBLite consensus disorder prediction 437 456 - -
Lele37g1181 726 SUPERFAMILY Homeodomain-like 233 288 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1181 Lele-ChrLele37 21253771 21261231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1181 171 726 MYB Transcription Factor Family AT3G09370 45.694 2.86e-137 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele37g1181 Myb_DNA-binding 3.6e-14 CL0123