Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1175 ATGTCAAGAGCAGGGTCATCAAGATGGAGTCCAACCCCAGAACAACTGATGATTCTGGAGGAACTGTATAGGAGTGGGATTAGAACTCCTAGTGCTTCCCAAATCCAACATATAACAACTCACCTTTGTTTCTATGGTAGGATTGAAGGAAAGAATGTGTTCTATTGGTTTCAGAATCACAAGGCTAGGGATAGACAGAAGCTCAGGAGGCAACTAAGCAAGCAGCTCCAACTTCAACAACAGCAACGACAATATCATCAGATGCTGACAGCCCATCAGTGCCAAGTGATTAATCAGGATAAGACTCATCACTGGTTTTTTGGTGGTGTCTTTGATTCTTCTCCAGCTGGTTCTTCTTCTGCCCAACAAGTTTCTTTTTATAACCCAGCTTTCTTGCTTTCTCAGGGAGAAACGGGAGAGACAACATCAGAGACATGGAATGAGGCTGCACAGAGGCAACAAAGTGAGGTGGATAAAACAAAGACGTCATCATCATCACTTAACAACTATGGGATGAGTTGTTGGAGTGTTGTGGATGCTAATGAAGAAGCATCCTCATGTTGCAGTACAAGACGGCCTCCTCTCAAGACTCTTGACCTCTTTCCCACTACTTCCACCAAACTCAAACTCTGA 633 0.4392 MSRAGSSRWSPTPEQLMILEELYRSGIRTPSASQIQHITTHLCFYGRIEGKNVFYWFQNHKARDRQKLRRQLSKQLQLQQQQRQYHQMLTAHQCQVINQDKTHHWFFGGVFDSSPAGSSSAQQVSFYNPAFLLSQGETGETTSETWNEAAQRQQSEVDKTKTSSSSLNNYGMSCWSVVDANEEASSCCSTRRPPLKTLDLFPTTSTKLKL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1175 210 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Lele37g1175 210 Gene3D - 1 67 - -
Lele37g1175 210 CDD homeodomain 8 67 IPR001356 GO:0003677
Lele37g1175 210 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Lele37g1175 210 MobiDBLite consensus disorder prediction 142 165 - -
Lele37g1175 210 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 207 IPR044555 GO:0003700|GO:0099402
Lele37g1175 210 SMART HOX_1 4 71 IPR001356 GO:0003677
Lele37g1175 210 FunFam WUSCHEL-related homeobox 4 6 73 - -
Lele37g1175 210 SUPERFAMILY Homeodomain-like 4 70 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1175 Lele-ChrLele37 21222254 21223540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1175 1 209 Wox Gene Family AT2G28610 42.017 2.63e-42 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele37g1175 Homeodomain 6.3e-18 CL0123