Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1155 ATGGTCTCGATCCAACAGGAAGAGACTGAGACTGAAGAGAAAGTCGTGAATCCCTCTGAATCTACGAAAATGGCAAAATCGTCAGCCTTCTCCAATGTCGATGACCATAAAGAAGCTTCTGATGGCTTTGAAACCGCTAGCGACACCGAGCTCGGCAGCGACGTAGAGGATACGCATAAAGAACGGGAACAACAACATCAACATCAGGAGCTGGGGATTCCTCCGGGGGCTGATTCTTCCGAAGAGGCATCACACAGCGAGGAATTGAAACAGAAAGCATTGGCTCAAGCGAATGATGCAAAATTAGAAGGGAATAAGCTCTTTGGGGATGGGCAATTTGAGGAGGCATTATCAAAGTATGAACTTGCTTTACAAATTGCTCCAGATATGCCTTCATCTGTTGAAGTACGCTCAATATGCCATTCAAATCGTGCTGTATGCTTTATGAAATTGGGGAAATATGAGGACACAATCAAAGAGTGCACTAAGGCATTGGAACTCAATCCTGCATATCTGAAAGCTCTGTTGAGAAGAGGCGAGACGCATGAGAAGCTTGAGCATTTTGAAGAGGCCATTGCTGATATGAAAAAGGTCTTAGAAATTGATCCTTCAAATGATCAAGCTAGAAGAACCATTCAGAGATTGGAACCCCTGGCTGCAGAAAAGCGGGAAAAGATGAAGGAAGAAATGATTGGTAAACTGAAAGAAATGGGCAATTCTGTGTTGGGACGCTTTGGAATGAGCGTTGACAACTTCAAAGCTGTTCAAGATCCAAACACTGGTTCCTATTCCATCTCATTCCAACGCTAA 810 0.4395 MVSIQQEETETEEKVVNPSESTKMAKSSAFSNVDDHKEASDGFETASDTELGSDVEDTHKEREQQHQHQELGIPPGADSSEEASHSEELKQKALAQANDAKLEGNKLFGDGQFEEALSKYELALQIAPDMPSSVEVRSICHSNRAVCFMKLGKYEDTIKECTKALELNPAYLKALLRRGETHEKLEHFEEAIADMKKVLEIDPSNDQARRTIQRLEPLAAEKREKMKEEMIGKLKEMGNSVLGRFGMSVDNFKAVQDPNTGSYSISFQR 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1155 269 ProSiteProfiles TPR repeat profile. 172 205 IPR019734 GO:0005515
Lele37g1155 269 SUPERFAMILY TPR-like 96 216 IPR011990 GO:0005515
Lele37g1155 269 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 13 269 - -
Lele37g1155 269 MobiDBLite consensus disorder prediction 30 44 - -
Lele37g1155 269 Pfam Tetratricopeptide repeat 173 205 IPR013105 -
Lele37g1155 269 Pfam Tetratricopeptide repeat 140 170 IPR001440 GO:0005515
Lele37g1155 269 SMART tpr_5 138 171 IPR019734 GO:0005515
Lele37g1155 269 SMART tpr_5 172 205 IPR019734 GO:0005515
Lele37g1155 269 SMART tpr_5 97 130 IPR019734 GO:0005515
Lele37g1155 269 Gene3D Tetratricopeptide repeat domain 57 235 IPR011990 GO:0005515
Lele37g1155 269 ProSiteProfiles TPR repeat profile. 138 171 IPR019734 GO:0005515
Lele37g1155 269 MobiDBLite consensus disorder prediction 52 68 - -
Lele37g1155 269 MobiDBLite consensus disorder prediction 1 90 - -
Lele37g1155 269 ProSiteProfiles TPR repeat profile. 97 130 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1155 Lele-ChrLele37 21078142 21081169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1155 97 228 Calmodulin-binding Proteins AT3G25230 37.143 1.01e-14 72.0