Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1101 ATGGAAAGATATAAAATTTTGAGGGAGCTCGGAGATGGTTCTTGCGGTCATGTATATAAAGCCCGTGATTTGAGGACATACGAGATTGCCCTTCGGAAAATGAATCACCCAAATATCATAAAGTTGAAAGAGGAGTATAATCTTTATCAATTAATAAAAGACAGACAAAAGCCCTTTTCAGAGGAAGACATACGTTCTTTCATGAAGCAAATGCTTCAAGGTCTTAGTCACATGCACAAGAAAGGATTCTTTCACCGGGACATGAAACCGGGTAAGACATATTGCACCACTGCAAATTTTTGTTGGCACCATATTGTTTATATTCTCTTGTCCAATCTGCTTGAAGTGTCAAATAAGTCACGTTCTCATAGTGATTATTTTCTTTGTAAAGAGAATTTGCTGGTGACCAATGATGTTCTTAAAATTGCTGACTTCGGACTGGCTAGAGAAGTATCATCGTTGCCTCCTTATACTCAATATGTTTCCACACGGTGGTATCGAGCTCCGGAAGTTTTGTTACTGTCTCCATGTTATACTCCTGCTGTTGATATGTGGGCAGCTGGCGCTATATTAGCTGAGCTTTTCACCTTGAACCCCATATTCCCTGGTGAAAGTGAAATAGATCAACTGTACAAGATATATTGTGTTCTTGGTACACCAGATTTGACTTCTTTCCCTGTGGGAGCAAACAACATGAGGCTATTAGACATTGTTGGTCATGAAGTGGTTCCGCCTTCAAAGCTTTCTGATATAATTCCTAACGCTAGCTCAGAAGCTATAGATTTGATCACGGTGAGTACATGGGTTCCTTGTCCAATTCGTGATCCACTTGAACTAAAGCTGAGTAGCAAGAGGGCAAAACCAAATCTTGAGCTCAAGTTGCAGGATTTTGGCCCTGACCCCAATGACTGTTTTCTTGGCTTAACGTTAGCTGTAAAGCCCAGCATTTCAGACTTGGTTAAAGAGAATCTCACAAGATCCACACAGCTTCCATTAATTTATGCTGTCTTACCTTAG 1017 0.4041 MERYKILRELGDGSCGHVYKARDLRTYEIALRKMNHPNIIKLKEEYNLYQLIKDRQKPFSEEDIRSFMKQMLQGLSHMHKKGFFHRDMKPGKTYCTTANFCWHHIVYILLSNLLEVSNKSRSHSDYFLCKENLLVTNDVLKIADFGLAREVSSLPPYTQYVSTRWYRAPEVLLLSPCYTPAVDMWAAGAILAELFTLNPIFPGESEIDQLYKIYCVLGTPDLTSFPVGANNMRLLDIVGHEVVPPSKLSDIIPNASSEAIDLITVSTWVPCPIRDPLELKLSSKRAKPNLELKLQDFGPDPNDCFLGLTLAVKPSISDLVKENLTRSTQLPLIYAVLP 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1101 338 Pfam Protein kinase domain 128 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g1101 338 Pfam Protein kinase domain 46 90 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g1101 338 Gene3D Transferase(Phosphotransferase) domain 1 45 91 - -
Lele37g1101 338 Gene3D Phosphorylase Kinase; domain 1 1 38 - -
Lele37g1101 338 ProSiteProfiles Protein kinase domain profile. 1 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g1101 338 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 21 263 - -
Lele37g1101 338 Gene3D Transferase(Phosphotransferase) domain 1 104 263 - -
Lele37g1101 338 SUPERFAMILY Protein kinase-like (PK-like) 1 265 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1101 Lele-ChrLele37 20687438 20692262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1101 1 264 Core Cell Cycle Gene Families AT2G38620 34.328 3.66e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Lele37g1101 Pkinase 1e-23 CL0016