Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1085 ATGTCCTCCATGAACATCGGCGATGAGAGTTGCCACCGCCACCACACGTTCCCGGAGTTAGATTTTCAGGACATGAAGGTGATCTCCGCCGTGGGCCGCGGTGCCAAGGGCGTTGTGTTCGCGGCCACGAGAAATGACGATGTGTCTGGTGAGTATTTCGCTTTGAAAGTGATCTCCAAGGCTTTGATTCAAAAGAAAGCGAAGGCGGTGAACAACGGTGACGGCGAGTGCAATAGGGTGTCGTTTGAACAGCATGTGCTGCGTCGTTTTGATCACCCTCTCTTGCCTCGGTTGCGAGGGGTTCTGGAAACCGACAAGATTATTGGGTACGCCATCGATTATTGCCCCGGCGGCAATCTCCATTCTCTCCGGAAAAAGCAGACTGAGAAGATGTTCTCCGATGATAGCATAAGGTTTTATGCTGTGGAATTGGTCCTTGCATTGGAGTATCTGCATAGTTTGGGAATAGTTTATAGAGATTTGAAGCCAGAGAACATACTGATCCAAGAAAATGGTCACATAATGCTCGTCGACTTCGATCTATCCAAGAAACTAATCCCAAAATCTCCAAAATCCCAGAGTAGCTCCTCGTCGCCGATTTCCCACTCGTCAAAGACGACGGCAATGAAGGACCTACGGAAGAAACGCTTCTTCCGATTCTACAGTTGCTCCGTGCCAACCCCTTCGTCGTACGAACCACAAGCCTCACCGGAATTTCACTGTTCGCGGCGGAGCGAGTCAGACTCGGTGGAGAAATCGAATTCGTTCGTTGGTACGGAGGAATACGTAGCACCCGAAGTAATCACAGGGAAGGGACATAACTTCGGAGTCGATTGGTGGTCACTCGGCGTCGTTTTATACGAGATGCTGTACGGAACGACGCCGTTTAGGGGGGAGAACAGGAAAGAAACGTTTTATCGGATTATGACGAAGGAACCGGAGTTGACCGGAGAGAAGACGGAGTTGAGGGATTTGATCGCGAGGTTGCTGGAGAAGGATCGTGACCGTCGGATCGACGTGGAAGGGATCAAGGGCCACAATTTCTTCCGAGGGGTTCAGTGGGACTCGGTTTTGCAGTTAGCACGGCCGCCGTATATTCCGTTGAATGAAGTAGGGGACACAAATGGGTTTAACAAAAGTCAAGTGGAGATATTTGTCCATGAGGTATTTTTTGGGAAGGAAGGGGAGGAAGAGAAGGGGACCAAAAAAGAAGAAAATAATAGTGATGATGACGATAAAGAGAATAATAAGAACGTGTGGGTAGAGAAGTTGAGTCATCAGAGTCCCACAGAGAATGAGGATTTTTTAATTTTTTGA 1317 0.4875 MSSMNIGDESCHRHHTFPELDFQDMKVISAVGRGAKGVVFAATRNDDVSGEYFALKVISKALIQKKAKAVNNGDGECNRVSFEQHVLRRFDHPLLPRLRGVLETDKIIGYAIDYCPGGNLHSLRKKQTEKMFSDDSIRFYAVELVLALEYLHSLGIVYRDLKPENILIQENGHIMLVDFDLSKKLIPKSPKSQSSSSSPISHSSKTTAMKDLRKKRFFRFYSCSVPTPSSYEPQASPEFHCSRRSESDSVEKSNSFVGTEEYVAPEVITGKGHNFGVDWWSLGVVLYEMLYGTTPFRGENRKETFYRIMTKEPELTGEKTELRDLIARLLEKDRDRRIDVEGIKGHNFFRGVQWDSVLQLARPPYIPLNEVGDTNGFNKSQVEIFVHEVFFGKEGEEEKGTKKEENNSDDDDKENNKNVWVEKLSHQSPTENEDFLIF 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1085 438 MobiDBLite consensus disorder prediction 188 206 - -
Lele37g1085 438 FunFam Serine/threonine-protein kinase OXI1 251 368 - -
Lele37g1085 438 SUPERFAMILY Protein kinase-like (PK-like) 26 376 IPR011009 -
Lele37g1085 438 FunFam Serine/threonine-protein kinase OXI1 119 187 - -
Lele37g1085 438 Gene3D Transferase(Phosphotransferase) domain 1 119 190 - -
Lele37g1085 438 Gene3D Transferase(Phosphotransferase) domain 1 240 368 - -
Lele37g1085 438 Gene3D Phosphorylase Kinase; domain 1 24 118 - -
Lele37g1085 438 MobiDBLite consensus disorder prediction 188 207 - -
Lele37g1085 438 Pfam Protein kinase domain 27 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g1085 438 Pfam Protein kinase domain 251 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g1085 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Lele37g1085 438 MobiDBLite consensus disorder prediction 227 246 - -
Lele37g1085 438 MobiDBLite consensus disorder prediction 395 420 - -
Lele37g1085 438 PANTHER FLIPPASE KINASE 1-RELATED 19 372 - -
Lele37g1085 438 MobiDBLite consensus disorder prediction 395 438 - -
Lele37g1085 438 ProSiteProfiles Protein kinase domain profile. 25 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g1085 438 SMART serkin_6 25 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1085 Lele-ChrLele37 20566155 20567709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1085 7 438 AGC Kinase Gene Family AT3G25250 57.403 1.65e-157 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele37g1085 Pkinase 1.3e-32 CL0016