Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1056 ATGGCTACGATGAACAGTGTGGTTTGCTTCTTTTTCATCCTGGTTAACATTTTCTTAAGCTCTCAACCAACTCAATCAGCTCCAGAAGGTGCTCTCATAACAGAGCTTCCTGGATTTAATGGCACTATACCTTCCAAGCACTATGCCGGTTATGTGACGGTGGATGAAAGTCATGGGAGGAGCCTGTATTATTACTTTGTTGAATCAGAAAGCAATCCATCTGAGGATCCTGTGGTTTTATGGCTAAATGGCGGACCCGGATGCTCTAGCTTCGATGCTTTTGTATACGAGCATGGTCCTTTCAATTTTGAAAAGGCCAAAACAAAGGGATCGTTGCCCACATTGCACCTCAATCCTCACAGCTGGTCAAAGGTTTCCAACATCATATATTTGGATTCTCCAGCTGGTGTGGGGTTTTCTTTCTCAAAGAATAGATCTGATTACGAAACTGGAGACATAAAGACTGCTTCAGATACACACACCTTTCTTCTTAAGTGGTTTGAACTCTATCCTGAGTTCCTTTCTAACTCATTCTTCATCGCTGGAGAGTCATATGCTGGAATTTATGTACCTACACTAGCTTATGAAGTAATGAAAGGAATTGATGCTGGTGCAAGGCCCAACCTGAATTTCAAGGGATATTTAGTTGGAAACGGCTGTACAGATGATGAATTTGATGGCAATGCTCTTGTTCCATTTGCACATGGGATGGGTCTTATCTCAGATGAATTGTATGAGGAGGTTACAGTTGAGTGCGATGGGAATTTCTATAATCCATTGAATGAAAGTTGTGCAACAAATCTAGCAAAAGTTGATCAGGAGATTGATGGGCTAAACATATATGACATTCTAGAACCATGCTATCATGTGCGCGGGACAGTGGAGACTAAACCATCCTATATCAGGTTGCCGTCCAGTTTCCAGCAGTTAGGTGAGACTGAGAGACCTCTACCTGTGAGAAAAAGGATGTTTGGTCGTGCTTGGCCCCTTAGAGCTCCTGTGAGAGATGGAATTGTGCCAACTTGGCCTCAACTTAGCAATAGCCACAAGGCTCCGTGCACTGATGACGAGGTCGCGAACTCCTGGTTGAACAATGACATAGTCCGGAAGGCAATTCACACTGCAGAGAAATCTGATGTCAGTATTTGGGATTTATGCACGGATAACATTTTATACAATCATGATGCTGGGAGCATGATCAAATTCCACAGGAACCTGACATCCAGAGGATACCGAGCACTTATATACAGTGGGGATCATGATATGTGTATTCCATTCACTGGAAGTCAAGCATGGACTAGATCAATGGGATACAAAGTTGTGGATGAATGGAGGCCGTGGATAGTCAATAATCAAGTTGCTGGTTATATACAAGGATATGATAAAAATCTCACGTTTATGACCATAAAGGGAGCTGGGCACACTGTTCCAGAATATAAGCCACAAGAGTCATTTTATTTCTATAAGCGCTTTCTGGATGGATTGCAAATGTAG 1494 0.4257 MATMNSVVCFFFILVNIFLSSQPTQSAPEGALITELPGFNGTIPSKHYAGYVTVDESHGRSLYYYFVESESNPSEDPVVLWLNGGPGCSSFDAFVYEHGPFNFEKAKTKGSLPTLHLNPHSWSKVSNIIYLDSPAGVGFSFSKNRSDYETGDIKTASDTHTFLLKWFELYPEFLSNSFFIAGESYAGIYVPTLAYEVMKGIDAGARPNLNFKGYLVGNGCTDDEFDGNALVPFAHGMGLISDELYEEVTVECDGNFYNPLNESCATNLAKVDQEIDGLNIYDILEPCYHVRGTVETKPSYIRLPSSFQQLGETERPLPVRKRMFGRAWPLRAPVRDGIVPTWPQLSNSHKAPCTDDEVANSWLNNDIVRKAIHTAEKSDVSIWDLCTDNILYNHDAGSMIKFHRNLTSRGYRALIYSGDHDMCIPFTGSQAWTRSMGYKVVDEWRPWIVNNQVAGYIQGYDKNLTFMTIKGAGHTVPEYKPQESFYFYKRFLDGLQM 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1056 497 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
Lele37g1056 497 Gene3D alpha/beta hydrolase 25 319 IPR029058 -
Lele37g1056 497 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 481 IPR001563 GO:0004185|GO:0006508
Lele37g1056 497 Gene3D - 349 496 - -
Lele37g1056 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Lele37g1056 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Lele37g1056 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 464 477 IPR001563 GO:0004185|GO:0006508
Lele37g1056 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Lele37g1056 497 Pfam Serine carboxypeptidase 37 494 IPR001563 GO:0004185|GO:0006508
Lele37g1056 497 FunFam Carboxypeptidase 352 496 - -
Lele37g1056 497 FunFam Carboxypeptidase 399 494 - -
Lele37g1056 497 FunFam Carboxypeptidase 26 310 - -
Lele37g1056 497 SUPERFAMILY alpha/beta-Hydrolases 33 495 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1056 Lele-ChrLele37 20324095 20328957 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1056 358 494 Calmodulin-binding Proteins AT2G22960 48.175 6.42e-42 146