Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1054 ATGGCACTACGCATTCCAAGCACCACACCCTTTTTGGGTCTTCATCCATCTTCGTCTTCTACTCCCTCTTCTGTTTGTCAGCTTCATCAGCTGACAAACAGTGTGGTCCGCTTCTTCCATTCCGTCTTACTGTTTGACACTGTTTTCAGAGCTATCAGCCAAACCAATCAGCTCCTAAAAGATGCTCTCGTGACAGAGCTTCCTGGATTATCAATGGCACTACGCCTTCCAAGCACCTCACCCCTTCTTCAGCGAATTTTATCAAACAGTATGGCTACGAGAAACAGTGTGGTCTGCTTCTTCTATATTGTCTTCCTTAACATTTTCTTGAGTTCTCTGCCAACCCAATCAGGCCCTGAAGCTGCTCTCGTCACAGAGCTTCCTGGATTCAATGGCACTTTACCTTCAAAGCACTATGCCGGCTACGTGACTGTGGATGAAAGTCAAGGGAGGAACCTGTATTACTATTTTGTTGAATCAGAAGGAAATCCATCTGAGGATCCTGTGGTTTTATGGCTCAACGGTGGACCAGGGTGCTCTAGCTTCGACGGCTTCGTGTATGAGCATGGTCCTTTCAATTTTGAAAAGGCCAAAACCAAGGGATCCTTGCCCTCATTGCACCTCAATCCTTATAGCTGGTCAAAGGTTTCCAACATTATATATTTGGATTCTCCAGCTGGTGTGGGGTTTTCTTACTCTCAAAATACATCTGATTACCCAACTGGAGACCTAAGGACTGCTTCAGAGTCACACACCTTTCTCCTTAAGTGGTTTGAACTCTATCCTGAGTTCCTTTCTAACCCATTCTTCATCGCTGGAGAGTCGTATGCCGGAATTTATGTACCTACGCTAGCTTATGAAGTAGTAAAAGGAATAGAAGCTGGTGCAGAGCCCAACCTGAATTTCAAGGGGTATTTGGTAGGAAATGGCGTTGCAGATGATGAAATTGATGGCAATGCTCTTATTCCATTTACACATGGGATGGGTCTTATCTCAGATGAATTGTATGAGGAGACTAGAAATGTGTGCAATGCTAATTACTATGTTCCAGTGAATGAAGAATGTGAAAAATTGATAGCCAAAGTTAATGAGTTGATTCATGATCTAAACGTATACAACATTCTAGAACCATGCTATCATGGGAATGAGACAGTAGAGGCTACAACATCCTACATTAGGTTGCCGTCCAGTTTCCGGCAGTTAGGCGGCACGACCGGGAGACCTGTACCGGTGAGAAAAAGGATGTTTGGTCGTGCTTGGCCCCTTGGAGCTCCCGTGAAAGATGGAATTGTACCAACTTGGCCGGAACTTAGCAGTAGCAGTGGCGGCACCATTGTTCCATGCACTGATGATGAGGTTGCAACCATATGGTTGAACAATGAGACAGTCAGGAAAGCAATTCACACTGCATCGGAAAGTGATGTGAAGACTTGGATTATATGCACGAAAGTTATTAGTCCTTTCGTTCATGATTCTGGGAGCATGCTCAAATACCACTGGAGCTTGACATCCAAAGGATATCGAGCACTTATATACAGTGGCGATCATGATATGTGTGTCCCATTCACCGGAAGTCAAGCATGGGTTAACTCAATGGGATACGAAGTTGTGGATGAATGGAGGCCATGGATGGTCAATAACCAAGTTGCTGGTTATATACAAGGGTATGATAAAAATCTCACCTTTATGACCATAAAGGGAGCTGGGCACACTGTTCCAGAATATAAGCCACAAGAATCACTGTATTTCTATAAGCAATTTCTTGATGGATCGCCAATATGA 1782 0.4416 MALRIPSTTPFLGLHPSSSSTPSSVCQLHQLTNSVVRFFHSVLLFDTVFRAISQTNQLLKDALVTELPGLSMALRLPSTSPLLQRILSNSMATRNSVVCFFYIVFLNIFLSSLPTQSGPEAALVTELPGFNGTLPSKHYAGYVTVDESQGRNLYYYFVESEGNPSEDPVVLWLNGGPGCSSFDGFVYEHGPFNFEKAKTKGSLPSLHLNPYSWSKVSNIIYLDSPAGVGFSYSQNTSDYPTGDLRTASESHTFLLKWFELYPEFLSNPFFIAGESYAGIYVPTLAYEVVKGIEAGAEPNLNFKGYLVGNGVADDEIDGNALIPFTHGMGLISDELYEETRNVCNANYYVPVNEECEKLIAKVNELIHDLNVYNILEPCYHGNETVEATTSYIRLPSSFRQLGGTTGRPVPVRKRMFGRAWPLGAPVKDGIVPTWPELSSSSGGTIVPCTDDEVATIWLNNETVRKAIHTASESDVKTWIICTKVISPFVHDSGSMLKYHWSLTSKGYRALIYSGDHDMCVPFTGSQAWVNSMGYEVVDEWRPWMVNNQVAGYIQGYDKNLTFMTIKGAGHTVPEYKPQESLYFYKQFLDGSPI 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1054 593 Gene3D - 445 593 - -
Lele37g1054 593 ProSitePatterns Serine carboxypeptidases, serine active site. 271 278 IPR018202 GO:0004185
Lele37g1054 593 PRINTS Carboxypeptidase C serine protease (S10) family signature 209 221 IPR001563 GO:0004185|GO:0006508
Lele37g1054 593 PRINTS Carboxypeptidase C serine protease (S10) family signature 257 282 IPR001563 GO:0004185|GO:0006508
Lele37g1054 593 PRINTS Carboxypeptidase C serine protease (S10) family signature 222 232 IPR001563 GO:0004185|GO:0006508
Lele37g1054 593 PRINTS Carboxypeptidase C serine protease (S10) family signature 560 573 IPR001563 GO:0004185|GO:0006508
Lele37g1054 593 SUPERFAMILY alpha/beta-Hydrolases 124 592 IPR029058 -
Lele37g1054 593 FunFam Carboxypeptidase 447 592 - -
Lele37g1054 593 Pfam Serine carboxypeptidase 128 590 IPR001563 GO:0004185|GO:0006508
Lele37g1054 593 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 124 577 IPR001563 GO:0004185|GO:0006508
Lele37g1054 593 FunFam Carboxypeptidase 495 590 - -
Lele37g1054 593 Gene3D alpha/beta hydrolase 117 390 IPR029058 -
Lele37g1054 593 FunFam Carboxypeptidase 117 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1054 Lele-ChrLele37 20314376 20319008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1054 453 593 Calmodulin-binding Proteins AT2G22960 44.681 6.82e-38 136