Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1027 ATGGCGAACTCACAAAACTCCGCTTCCCTATCATCCAAGCCTCTCCACAACGAAGATGACGGCTTCTCCTCCGCCCTGCTGATTTGCAATTCTACTGCTATTTCAATGGCGATGCACGCGGTGTTGGACCTCGGCCTCTTCGACATCATTGACAAAGCTGGCCCCGACGCCAGGCTCTCCGCGGCTGAGATCGCAGCGAAGCTCCCTTGCAAGAACCCCGGTGCGCCTACCTGGGTTGATCGTCTCCTCCGGCTTCTGGCGGATTATTCTGTGCTTCACTGTGTCAACACTGTTGGAAATCAAGAGACGGGCGGTGTCCGGCGATTGTATGGCCTCACTCCGGTGGCTAGATTCTTTCTGCCAGATGTCCATGGTGCATCCATGGGCCCTTACCTTAAGATGACTCATCATGAAAGCCAAATCAACTGTTGGTCGCACATGAAAGATTCAATTTTGGAAGGTGGTGATAGTCCATTCAAGAGGCGCAATGGTTCTGATTTTTATGATTATAGGAATTTGGATTTGAGTTTCGGAGCCCTTTTTAATGAAGCAATGGTGGATTATACCACTATCCTTATGAACAAGATTCTTGAAACCTACAAAGGTTTTGAGGAACTCAATAGCCTTGTGGATGTTGGAGGCGGTCTTGGTATTACTGTCAAAATGATCACTTCTAAATATCCTCATATTCAAGGAATCAATTTTGACTTACCAACTGTCGTACAAAAAGCTCCTTCGTATCCTGGCGTGAAACACGTGGGAGGAGATATGTTTGAAAGTGTGCCAAAAGGGGATGCAGTCTTCGTGAGGTGGATACTTCAAGATTGGAGTGATGAGCAGTGCGTGAAGCTGTTAAAGCACTGCTATGATGCCACTCCAAAGAATGGGAAACTGATATTGGTGCATGCTGTTCTGGACACTGAACCAGATAATTCTGCTACTACTAAGATCAACAACCAATATGAAATTATCTTAAGGACATATACAGGTGGCAGAGAGAGAACCAAGCAGGAGTACATGAATTTGATTAAATCTGCTGGGTTTAGTGGCATTAGATTTGAATGCCTTGTTTATGCTGTGTGGGTTATGGAGATCTTTAAGTAG 1104 0.4574 MANSQNSASLSSKPLHNEDDGFSSALLICNSTAISMAMHAVLDLGLFDIIDKAGPDARLSAAEIAAKLPCKNPGAPTWVDRLLRLLADYSVLHCVNTVGNQETGGVRRLYGLTPVARFFLPDVHGASMGPYLKMTHHESQINCWSHMKDSILEGGDSPFKRRNGSDFYDYRNLDLSFGALFNEAMVDYTTILMNKILETYKGFEELNSLVDVGGGLGITVKMITSKYPHIQGINFDLPTVVQKAPSYPGVKHVGGDMFESVPKGDAVFVRWILQDWSDEQCVKLLKHCYDATPKNGKLILVHAVLDTEPDNSATTKINNQYEIILRTYTGGRERTKQEYMNLIKSAGFSGIRFECLVYAVWVMEIFK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1027 367 Pfam Dimerisation domain 36 87 IPR012967 GO:0046983
Lele37g1027 367 FunFam Caffeic acid 3-O-methyltransferase 4 119 - -
Lele37g1027 367 Gene3D Vaccinia Virus protein VP39 122 367 IPR029063 -
Lele37g1027 367 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 367 IPR016461 GO:0008168
Lele37g1027 367 PIRSF O-mtase 2 367 IPR016461 GO:0008168
Lele37g1027 367 Gene3D - 3 119 IPR036388 -
Lele37g1027 367 Pfam O-methyltransferase domain 144 349 IPR001077 GO:0008171
Lele37g1027 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 364 IPR029063 -
Lele37g1027 367 PANTHER O-METHYLTRANSFERASE 28 348 IPR016461 GO:0008168
Lele37g1027 367 SUPERFAMILY "Winged helix" DNA-binding domain 20 122 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1027 Lele-ChrLele37 20116242 20118365 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1027 17 367 Monolignol Biosynthesis Gene Families AT5G54160 46.307 5.88e-114 334