Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1022 ATGACTTCATTTTTGAAGCCTGAGAATGCTCTGAAAAGAGCTGAAGAATTGATCAATGTTGGACAGAAGCAGGATGCTTTGCAAACTCTTCATGGCCTTATCACGTCAAAAAGATATAGGGCATGGCAGAAAACACTTGAAAGGATCATGTTTAAGTATGTAGAACTTTGTGTAGACATGCGGAAAGGGCGATTTGCAAAGGATGGGCTCATTCAGTATCGAATCATATGTCAGCAAGTTAATGTTAGTTCACTGGAGGAGGTGATCAAACATTTCATGCATCTGTCAACAGAGAAAGCTGAACAAGCTCGCAGCCAGGCACAGGCATTAGAAGAGGCTCTTGATGTTGATGATTTAGAGGCTGATAAAAGGCCGGAGGACTTGATGCTTAGCTATGTGAGTGGAGAGAAGGGAAAAGACAGATCCGACAGGGAGCTTGTTACTCCATGGTTTAAATTTCTTTGGGAAACATACAGGACTGTGCTTGAAATATTGCGCAACAATTCAAAACTGGAAGCTCTATATGCTATGACAGCGCATCGGGCTTTTCAGTTTTGTAAACAATATAAGCGAACAACTGAGTTCCGTAGACTTTGTGAAATTATAAGAAACCATCTTGCCAATCTTAATAAATATCGAGACCAACGGGACCGACCTGATCTTTCAGCACCTGAAAGCTTGCAACTATATCTGGATACCAGATTTGAGCAACTGAAAGTTGCCACTGAACTTGAACTCTGGCAGGAAGCTTTTAGATCTATTGAAGATATACATGGACTAATGTGCATTGTGAAGAAAACGCCCAAGGCATCTTTGATGGTTCTTTACTATGCGAAGCTGACAGAAATATTTTGGATGTCATCAAGCCATCTTTATCATGCATATGCATGGTTCAGGCTCTTTTTGCTGCAGAAGAGCTTCAATAAGAATCTGAGTCAGAAGGATCTGCAATTGATAGCTTCATCTGTTGTTCTGGCTGCACTTTCAGTGCCTCCCCATGATCACACTCAAGGTGCATCTCATTTGGAATTGGAGCATGAAAAAGAGAGGAACTTGAGGATGGCTAATCTCATTGGTTTTAACCTTGAAAGTAAACCTGATAGTAGAGAAGTGCTTTCAAGGTCAGCCCTTCTTGCTGAACTGGTGTCCAAGGGTGTAATGTCTTGTGCAACTCAGGAAGTGAAGGACATTTATCATCTCCTAGAACATGAATTTCTTCCCCTCGATCTTCCATCAAAAGTTCAGCCTCTGCTAACCAAAATATCCAAGTTAGGGGGTAAGCTCTCCACTGCTTCTTCGGTCCCTGAGGTGCAGCTGTCTCAGTATGCCCCAGCACTGGAGAAACTAGCAACCTTGAGGTTGCTACAGCAGGTGTCCAATGTATACCAGACAATGAAGATTGAGACCTTATCTGGAATGATCCCCTTTTTTGATTTTTCTGTAGTGGAAAGGATTTCTGTGGATGCTGCTAAGCATAACTTTGTATCCATGAAAGTTGACCACACGAGGAATGTTATAGTTTTCTGCAAGACGAGTCTTGAGTCTGATGGCTTAAGAGATCACTTGGCTAATTTTGCTGAATATCTGAATAAGGCAAGACAAATGATTTATCCTCCTGATAGGAAGCCATCAAAACTTGGAGCTTTGCTTCCCAGTTTGAATGAGGTTGTGGCCAAGGAACACAAGAGGCTTCTGGCACGGAAATCAATTATTGAGAAGCGAAAAGAAGAACAAGAACGGCATCTTCTTGAAATGGAAAGAGAAGAGGAATCGAAGAGATTAAGACTGCAGAAAATAACTGAAGAAGCAGAACAAAGAAGACTTGCCAATGAGTATGAGCAGAGGAAGAACCAGAGAATTCTCAGAGAAATAGAAGAAAGAGAAATGGAAGAAGCTCAGGCATTGCTTCAGGAAGCTGAGAAGCGCATTAAAAAGAAGGGAAAGAAGCCAATCATGGAGGGTGAAAAACTGACCAAGCAAACACTGATGGAGCTGACTTTGACTGAACAACTCCGGGAAAGGCAAGAAATGGAAAAGAAACTTCAAAAACTAGCTAAAACGATGGACTATTTGGAAAGAGCCAAAAGAGAGGAGGCTGCTCCCTTGATTGAAGCTGCATATCAAAAGCGCCTAGTTGAAGAGAAGCTTCTTCATGAGCGTGAGCAACAGCTTGAGATTGAAGTTAGCAAACAGTGCCATGAGGGAGATCTCAAGGAGAAGGAAAGACTGGCTCGTATGGTTGGCAATAAAGAGATTTATCAGGAGAGAGTCGTCAGTCATCGCCAGGCAGAATTTAGTAGATTGAGGCGGGAAAGAGAGGAGCGAATCTCAAGGATTTTACAGTCCAGGAGACAAGAGAGGGAAAAGATGAGGAAGTTGAAGTATTATCTGAGGTTAGAAGAAGAGAGACAGCAAAAATTGCTTGAAGAGGAGGAAGCTCGGAAGCGTGAAGAGGCTGAGAGGCGGAAGAAGGAAGAGGCTGAGCGCTTGGCAAAATTGGCTGAGATAGCAGAAAAGCAAAGGCAAAGAGAGCGGGAACTTGAAGAGAAGGCTGAGAGGCAGAAGAAAGAAGCACTGTTTGGAAGAAGTGGTGAAGCAGCTGTGAAGCCTCTTGAACCTTCAGGCCGCCCATTGGAGGGTGGTTCTTCCTCTGCCGCTCCTGCAGCAGCACCTGCTGCTGCAGCTGCACCAACCCCTGGGAAATATGTCCCTCGTTTCCGCCGTGAGAGCACTGAAGCCCCAAGCCCTGCTGCTGCTCCTCCAGAAACTGATCGATGGACAAACTCCAGCAGGCAGGATGGTGACAGATGGCGTAGTGATGATCGAAGACCTGCGTTCAGTGCTGGGGGGGGTTCGAGGTCATCATCAACATGGTCGTCATCTAGGCGTGGATCTGATCGTTGA 2904 0.4435 MTSFLKPENALKRAEELINVGQKQDALQTLHGLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKVATELELWQEAFRSIEDIHGLMCIVKKTPKASLMVLYYAKLTEIFWMSSSHLYHAYAWFRLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDHTQGASHLELEHEKERNLRMANLIGFNLESKPDSREVLSRSALLAELVSKGVMSCATQEVKDIYHLLEHEFLPLDLPSKVQPLLTKISKLGGKLSTASSVPEVQLSQYAPALEKLATLRLLQQVSNVYQTMKIETLSGMIPFFDFSVVERISVDAAKHNFVSMKVDHTRNVIVFCKTSLESDGLRDHLANFAEYLNKARQMIYPPDRKPSKLGALLPSLNEVVAKEHKRLLARKSIIEKRKEEQERHLLEMEREEESKRLRLQKITEEAEQRRLANEYEQRKNQRILREIEEREMEEAQALLQEAEKRIKKKGKKPIMEGEKLTKQTLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQKRLVEEKLLHEREQQLEIEVSKQCHEGDLKEKERLARMVGNKEIYQERVVSHRQAEFSRLRREREERISRILQSRRQEREKMRKLKYYLRLEEERQQKLLEEEEARKREEAERRKKEEAERLAKLAEIAEKQRQRERELEEKAERQKKEALFGRSGEAAVKPLEPSGRPLEGGSSSAAPAAAPAAAAAPTPGKYVPRFRRESTEAPSPAAAPPETDRWTNSSRQDGDRWRSDDRRPAFSAGGGSRSSSTWSSSRRGSDR 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1022 967 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Lele37g1022 967 MobiDBLite consensus disorder prediction 807 862 - -
Lele37g1022 967 Coils Coil 568 602 - -
Lele37g1022 967 Coils Coil 93 120 - -
Lele37g1022 967 Coils Coil 667 697 - -
Lele37g1022 967 Coils Coil 615 649 - -
Lele37g1022 967 FunFam Eukaryotic translation initiation factor 3 subunit A 352 494 - -
Lele37g1022 967 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Lele37g1022 967 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 956 IPR027512 GO:0005852
Lele37g1022 967 MobiDBLite consensus disorder prediction 807 967 - -
Lele37g1022 967 Gene3D - 354 493 - -
Lele37g1022 967 Gene3D - 268 342 - -
Lele37g1022 967 Pfam PCI domain 373 508 IPR000717 -
Lele37g1022 967 MobiDBLite consensus disorder prediction 928 943 - -
Lele37g1022 967 Gene3D UVR domain 217 267 - -
Lele37g1022 967 Coils Coil 796 857 - -
Lele37g1022 967 MobiDBLite consensus disorder prediction 949 967 - -
Lele37g1022 967 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 967 IPR027512 GO:0005852
Lele37g1022 967 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1022 Lele-ChrLele37 20083309 20088667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1022 1 966 Eukaryotic Initiation Factors Gene Family AT4G11420 71.967 0.0 1327