Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0980 ATGTTTACTCAGGAAATACGACAAGGTACATTGTTCATTACATCTGGCCTTAAATTGTTTATGGTGATGTCGTTCTTTTCATTGAAAGTCAACACACTTGTTCAGTCACAAAAACAAGGGGCTGGCCTTGACATTGCTAATTTACTGAAACCTGCACTTGTAAGGGGTCAATTTAAGCTGGTTGTGATTGCCTATGATGTAGACCCAATTGAACTGATTGTTTGGCTGCCAGCATTGTGCAGGAAGACAAAAATTCCCTAA 261 0.3946 MFTQEIRQGTLFITSGLKLFMVMSFFSLKVNTLVQSQKQGAGLDIANLLKPALVRGQFKLVVIAYDVDPIELIVWLPALCRKTKIP 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0980 86 SUPERFAMILY L30e-like 52 86 IPR029064 -
Lele37g0980 86 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 52 86 IPR004038 -
Lele37g0980 86 PRINTS Ribosomal protein L7A/RS6 family signature 61 74 IPR018492 -
Lele37g0980 86 PRINTS Ribosomal protein L7A/RS6 family signature 77 86 IPR018492 -
Lele37g0980 86 ProSitePatterns Chaperonins clpA/B signature 1. 44 56 IPR018368 GO:0005524
Lele37g0980 86 Gene3D - 27 86 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0980 Lele-ChrLele37 19655036 19656318 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0980 55 86 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 68.750 4.00e-11 55.1