Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0947 ATGTCGTCTTCTTTTGCTTCCTCATCGTCCAAATCCAAATGGTTTTTCCAATACGACGTCTTCTTAACTTTGAGAGATCCCATACACCCTGTAAAAACCTACCTTGAGAACTCTTTCAGAGAAGCTGGGATAACGACCTTCATTGATGAGCAGACAATCACGAAGGAGAAGTTTTCCGTACAAGAGACCGTAGAAAGATGTAGCATTGTTATGGTTGTTTTCACAGAAGACTGGCTTGAGTCTTGGCTGTTTCAGAAGAGACTGGTGAATATATTGAAGTGTCATGAAACTATGAATAAGCCGGTGGTGCCAGTGTTCTGTGGAGTGAATTCGGAGCAAGTTCTTGAGCATTTGACGTATTTCGATCCCACCAAATCAGAAGCTTGGGAATTATTCCTTTTGGGTTCGAGATCTTCAACAAGAGCCGGCGCCGTCGATAAAGCAGATGCTTCGCTATCTGCCTTCACGCTGTCATCGGAATCTGATTTCAGTTGGCATGCATTTAAGAAATTTAGTCCAACAATTGATTTTGTCGATCTTTCAAGAAAAATAACTACATTTTGTGAAGGACTGCCATTGGTTCTTGAAGTTTTTGGCTCTCTTTTGCATAGTAGGACAAGACTAGAGTGGAAAAATGTATTGAATAAATTGGAAATACTCCCAAAAGGTCAAATACAACAGAAGCTTAAGATAAGCCTTGACTTCTTAACTGATTTAGAGAAAGACTTATTCTTTAACATATCTTGCTTTTACGTGGGTCAGAGTGAAGAGTATGTTACCCAATTGTTAAAGGGCTCAAGATTTCCTGTAGAAATAGGAATGCCCATGATCATTGAGCGGAGCCTTATAAAGGTCATGAATGGAAAGATTCATGTTCATGATCTGCTCCAAGAGGGATGGAATGATGGAGGGATTGATAATAATTCTCTTCCAAGAGACAACTTTCCTGATTGGCTAGTTTTTGAGAATGAAGAGTCTTCCATATCATTTAAAGTGCCTCAAGTTGTTGGATTAGCGTTGCAAGGTTCACTTCAACAAAAAAAAAGGGTGAAGGGTGACAGGTTGAAAACTTCGTGA 1077 0.3974 MSSSFASSSSKSKWFFQYDVFLTLRDPIHPVKTYLENSFREAGITTFIDEQTITKEKFSVQETVERCSIVMVVFTEDWLESWLFQKRLVNILKCHETMNKPVVPVFCGVNSEQVLEHLTYFDPTKSEAWELFLLGSRSSTRAGAVDKADASLSAFTLSSESDFSWHAFKKFSPTIDFVDLSRKITTFCEGLPLVLEVFGSLLHSRTRLEWKNVLNKLEILPKGQIQQKLKISLDFLTDLEKDLFFNISCFYVGQSEEYVTQLLKGSRFPVEIGMPMIIERSLIKVMNGKIHVHDLLQEGWNDGGIDNNSLPRDNFPDWLVFENEESSISFKVPQVVGLALQGSLQQKKRVKGDRLKTS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0947 358 Gene3D - 1 130 IPR035897 -
Lele37g0947 358 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 122 IPR035897 -
Lele37g0947 358 Pfam NB-ARC domain 109 223 IPR002182 GO:0043531
Lele37g0947 358 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 245 IPR027417 -
Lele37g0947 358 Pfam TIR domain 18 115 IPR000157 GO:0007165
Lele37g0947 358 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 160 298 IPR044974 GO:0006952
Lele37g0947 358 SMART till_3 17 152 IPR000157 GO:0007165
Lele37g0947 358 Gene3D - 158 237 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0947 Lele-ChrLele37 19309950 19319920 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0947 179 298 WRKY Transcription Factor Family AT5G45050 32.231 1.25e-16 79.7