Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0940 ATGGAAGAGAAATCATTTGCACTTGATGCTATTATGAAGGAAGCTGTTGATCTGGGAAAGCCAGGAGATTATCCAGATTTTGGTGGCATAGTCGTGTTGCTTCTCATAAATTCTACCATAAGCTTCATAGAAGAAAACAATGCTGGAAATGCTGCTGCTGCACTTATGGCTCGTTTGGCCCCAAAATCTAAGGTACTACGTGATGGAAAATGGAATGAAGAAGATGCTTCAGTTTTGGTTCCTGGAGACGTAATTAGCATCAAGCTTGGTGACATCATTCCTGCAGATGCTCGTCTCCTTCAAGGAGATCCTTTGAAGATTGACCAATCTGCTCTGACTGGAGAGTCACTTCCAGTAACAAAAAATCCTGGAGATGGAGTATATTCTGGCTCAACTTGCAAGCAAGGAGAAATTGAAGCTCTAGTTATTGCCACTGGGGTCCACACTTTCTTTGGCAAAGCAGCTCATCTTGTGGAAAATACCACACACATAGGACACTTCCAGAAGGTTCTGACATCTATTGGAAACTTCTGCATTTGTTCGATCGCGGCTGGGATGTTTATCGAGATGATCGTGATATGGGGGGTTCACAAGAGAAGTTACCGAATTGGAATCGATAACCTCCTCGTGCTTCTCATTGGTGGCATCCCAATTGCAATGCCAACTGTTCTTTCTGTTACAATGGCTATTGGTTCACATAAATTGTCTCAGCAGATTCTCAGTCTTTCACATAACAAAGCAGAAATTGCACAGATGGTTCATACCATTATTGACAAGTTTGCAGAACGTGGACTACGGTCTCTTGCAGTAGCCCGGCAGGAAGTACATGAAGGAACTAAAGAAAGTGCAGGAGGCCCCTGGGAATTTGTTGGCCTTCTTCCACTTTTCGATCCTCCTCGCCATGATAGTGGAGAAACAATCAAAAGAGCTCTGGATCTTGGTGTGAGTGTCAAAATGATAACAGGAGATCAACTTGCAATTGCTAAGGAAACAGGAAGGCGTCTAGGAATGGGTACTAACATGTATCCTTCTTCATCTCTTCTGGGTGAACGCAAAGGTGAAACACTTGAGTCTCTCCCAATTGATGAGCTCATTGAGAATGCTGATGGATTTGCTGGTGTCTTTCCTGAACACAAGTATGAGATTGTGAAGAGGTTACAAGCTAGAAAACATATTTGTGGGATGACTGGTGATGGTGTAAATGACGCTCCCGCCTTGAAGATAGCCGACATAGGTATCGCCGTAGCAGATGCCACCGACGCTGCTCGAAGCGCATCCGACATAGTTCTAACAGAACCTGGATTGAGTGTGATCATAAGTGCTGTTTTAACTAGCCGTGCTATCTTCCAAAGGATGAAAAACTATACGATATATGCTGTATCTATCACTATACGTATTGTGCTGGGCTTTATGTTATTGACCTGCTTTTGGAAATTTGACTTCCCTCCCTTCATGGTTCTTATAATTGCCGTTCTCAATGATGGTACGATCATGACAATATCTAAAGATAGAGTTAAGCCTTCTCCAGCACCTGATAGTTGGAAGCTCAGTGAAATTTTTGCAACTGGGATTGTCCTTGGAAGCTATCTGGCTATAATGACTGTGATATTCTTCTGGGCAGCTTATGAAACTGACTTTTTCCACAACAATTTTCCTGTGGAAAACTTCAATTCAAACCTTTACGACATGTCAAATAAAGATATCGCCGAGGCACTAAATGAGAAGATGGGATCTGCAGTGTATCTTCAAGTCAGCATCATCAGTCAAGCATTAATCTTTGTAACTCGCTCTCATGGATGGTCTTATGCCGAACGACCTGGTCTTTTGCTCGTTATTGCTTTCATTATTGCTCAGCTGGTTGCAACGGTTTTATCTGCCACTGTGTCCTGGCATACTGCTGGAATAAGAAGCATAGGTTGGAAGTGGACAGGAGTCATTTGGCTATACAACATTGTAACTTATGTATTGTTGGATCCTATAAAATTTGCTGTCCGTTATGCATTAAGTGGAAGGGCATGGAATTTGGTCGTAAATCAAAGAACTGCGTTCACAAACAAAAATGACTTTGGAAGAGAAGCTCGTGAGGCTGCGTGGGCTGCTGAGCAGAGAACCCTGCATGGCCTTCAGTCTGCAACTGATTCAAAGATATTTGCAGATAAGCACACATTCAGGGAAATCAACACATTAGCAGAAGAGGCTAAGAGAAGAGCTGAAATAGCAAGGATGAGAGAGCTTCACACTTTGAAAGGAAAAGTGGAATCATTTGCCAAGTTAAGGGGTTTGGACGTTGAAAATATTAATGGGCACTACACTGTCTAA 2319 0.4265 MEEKSFALDAIMKEAVDLGKPGDYPDFGGIVVLLLINSTISFIEENNAGNAAAALMARLAPKSKVLRDGKWNEEDASVLVPGDVISIKLGDIIPADARLLQGDPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEALVIATGVHTFFGKAAHLVENTTHIGHFQKVLTSIGNFCICSIAAGMFIEMIVIWGVHKRSYRIGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQILSLSHNKAEIAQMVHTIIDKFAERGLRSLAVARQEVHEGTKESAGGPWEFVGLLPLFDPPRHDSGETIKRALDLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGERKGETLESLPIDELIENADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKIADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLTCFWKFDFPPFMVLIIAVLNDGTIMTISKDRVKPSPAPDSWKLSEIFATGIVLGSYLAIMTVIFFWAAYETDFFHNNFPVENFNSNLYDMSNKDIAEALNEKMGSAVYLQVSIISQALIFVTRSHGWSYAERPGLLLVIAFIIAQLVATVLSATVSWHTAGIRSIGWKWTGVIWLYNIVTYVLLDPIKFAVRYALSGRAWNLVVNQRTAFTNKNDFGREAREAAWAAEQRTLHGLQSATDSKIFADKHTFREINTLAEEAKRRAEIARMRELHTLKGKVESFAKLRGLDVENINGHYTV 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0940 772 Gene3D - 721 772 - -
Lele37g0940 772 FunFam Plasma membrane ATPase 289 444 - -
Lele37g0940 772 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 246 302 IPR023299 GO:0000166
Lele37g0940 772 PRINTS H+-transporting ATPase (proton pump) signature 396 412 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele37g0940 772 PRINTS H+-transporting ATPase (proton pump) signature 581 602 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele37g0940 772 PRINTS H+-transporting ATPase (proton pump) signature 427 452 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele37g0940 772 PRINTS H+-transporting ATPase (proton pump) signature 368 384 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele37g0940 772 PRINTS H+-transporting ATPase (proton pump) signature 253 271 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele37g0940 772 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 371 476 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele37g0940 772 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 30 244 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele37g0940 772 Gene3D - 235 296 IPR023299 GO:0000166
Lele37g0940 772 FunFam Plasma membrane ATPase 61 145 - -
Lele37g0940 772 PRINTS P-type cation-transporting ATPase superfamily signature 396 415 - -
Lele37g0940 772 PRINTS P-type cation-transporting ATPase superfamily signature 108 122 - -
Lele37g0940 772 PRINTS P-type cation-transporting ATPase superfamily signature 419 431 - -
Lele37g0940 772 SUPERFAMILY HAD-like 288 442 IPR036412 -
Lele37g0940 772 FunFam ATPase 4 plasma membrane-type 380 636 - -
Lele37g0940 772 Gene3D - 384 667 - -
Lele37g0940 772 Pfam E1-E2 ATPase 59 237 - -
Lele37g0940 772 Gene3D - 30 160 - -
Lele37g0940 772 SUPERFAMILY Calcium ATPase, transduction domain A 62 158 IPR008250 -
Lele37g0940 772 Pfam haloacid dehalogenase-like hydrolase 288 410 - -
Lele37g0940 772 SUPERFAMILY Calcium ATPase, transmembrane domain M 20 668 IPR023298 -
Lele37g0940 772 FunFam Membrane H(+)-ATPase1 236 296 - -
Lele37g0940 772 PANTHER CALCIUM-TRANSPORTING ATPASE 237 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0940 Lele-ChrLele37 19244018 19252636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0940 233 772 Primary Pumps ATPases AT5G62670 75.000 0.0 838