Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0935 ATGATCCCTAATTATTCTCCTTTCGAATCAGTTCAAGAATACCTGATTGAAGATGATCGTCCTTCCTTCAAGGCTCTCATGAAGAACACGGCTTCACCGGAGCAGGGTGTTAGTAGCTCCACTTGTACAGTCTTCTCCGCCGAGAATGCCGACACGGCTGTGACTTCAGATGACAACAGAGTAAATGATGGTGATAACGCAGGATCTGTGGCGCGTGAAAGGGACGCGCCATCAAGGTGGAGGAATTACCGAGGTGTGAGGAGGCGGCCGTGGGGAAAGTTCGCGGCTGAGATCCGGGACCCGAAGAGAAACGGTGCAAGGACATGGCTGGGAACTTATGAGAAGGAAGAGGATGCAGCTTTGGCTTATGACACAGCAGCTTTCAAGATGCATGGGAGAAAAGCCAAGCTCAATTTTCCACACCTCATCGGATCCGAACCACTGCCGTCGGAGGCAGTAAGAGTGGTGGCAGCTGGACAGGAGAGACGCAGCTTGCCGGAACCTTCATCGCCGTCAAACAGTACATCTGAGGAATATGATGGATCTCAAGGGGCAAGTAAGAAGAAGAGGCTCACTGGTCTATTGAACAAGTTAGCAACAAATAGAAACCATGTCAGATTCGGTTGA 627 0.5056 MIPNYSPFESVQEYLIEDDRPSFKALMKNTASPEQGVSSSTCTVFSAENADTAVTSDDNRVNDGDNAGSVARERDAPSRWRNYRGVRRRPWGKFAAEIRDPKRNGARTWLGTYEKEEDAALAYDTAAFKMHGRKAKLNFPHLIGSEPLPSEAVRVVAAGQERRSLPEPSSPSNSTSEEYDGSQGASKKKRLTGLLNKLATNRNHVRFG 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0935 208 MobiDBLite consensus disorder prediction 50 76 - -
Lele37g0935 208 FunFam Ethylene-responsive transcription factor 2 81 141 - -
Lele37g0935 208 SUPERFAMILY DNA-binding domain 82 141 IPR016177 GO:0003677
Lele37g0935 208 PANTHER DNA-BINDING DOMAIN 52 180 IPR044808 GO:0003700|GO:0009873
Lele37g0935 208 MobiDBLite consensus disorder prediction 159 208 - -
Lele37g0935 208 SMART rav1_2 82 146 IPR001471 GO:0003700|GO:0006355
Lele37g0935 208 MobiDBLite consensus disorder prediction 165 181 - -
Lele37g0935 208 PRINTS Ethylene responsive element binding protein signature 122 142 IPR001471 GO:0003700|GO:0006355
Lele37g0935 208 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Lele37g0935 208 ProSiteProfiles AP2/ERF domain profile. 82 140 IPR001471 GO:0003700|GO:0006355
Lele37g0935 208 Pfam AP2 domain 82 132 IPR001471 GO:0003700|GO:0006355
Lele37g0935 208 Gene3D AP2/ERF domain 81 141 IPR036955 GO:0003700|GO:0006355
Lele37g0935 208 CDD AP2 82 142 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0935 Lele-ChrLele37 19218126 19218752 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0935 83 178 AP2-EREBP Transcription Factor Family AT2G44840 67.708 2.90e-37 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele37g0935 AP2 1.6e-12 CL0081