Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0933 ATGATCCCTAACAACAATCTTTCTACTTTCAGATCATCATCAGTTCAGCAATACGATCATGATTCTTCTTCTTCTAAGACGACTCTCATGATGATGAATAATGTCTTCTTCAATTCAAGCTCTACTTCAAACCCTAACTACGACACTACGTCTTCGCTTGAGCAGTCTCTGAGTAACTCCAGTGGCACGGTGTTTTCCGGCGCGCATGAAGATGCCATGAAACCAGGGGGTGATTGGGCTAATAATAATGTTAGTAATGCGGAATCTGAATCTGTGGTTCCTGAGGTGAACGCACCACCTAGATGGAGGAATTACCGAGGCGTGAGGCGTCGGCCGTGGGGGAAGTTTGCTGCCGAGATCCGGGACCCAAAAAGGAACGGCGCGAGAACTTGGTTAGGGACATATGAGACGGAAGAAGATGCAGCTTTGGCTTATGATAGAGCTGCTTTTAAGATGAGGGGAAGAAAAGCCAAGCTCAATTTTCCACACCTCATTGGGTCGGAATCAGAACTGCCGCCACCGGAGCCGGTTGACAAAAAGAGGTGGCACTCACAGGAACCTTCATCTTCGTCAGGGTGCGCATCTGAGGATGGTGGATCTCAAGGGTCAAGTAAGAAGAAGAGCCTCACTAGTCTACTGAATAAGTTAGCAACAAATAGAAGCCAAGCTGGAAGCTTGAAATAA 684 0.4722 MIPNNNLSTFRSSSVQQYDHDSSSSKTTLMMMNNVFFNSSSTSNPNYDTTSSLEQSLSNSSGTVFSGAHEDAMKPGGDWANNNVSNAESESVVPEVNAPPRWRNYRGVRRRPWGKFAAEIRDPKRNGARTWLGTYETEEDAALAYDRAAFKMRGRKAKLNFPHLIGSESELPPPEPVDKKRWHSQEPSSSSGCASEDGGSQGSSKKKSLTSLLNKLATNRSQAGSLK 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0933 227 PRINTS Ethylene responsive element binding protein signature 144 164 IPR001471 GO:0003700|GO:0006355
Lele37g0933 227 PRINTS Ethylene responsive element binding protein signature 105 116 IPR001471 GO:0003700|GO:0006355
Lele37g0933 227 Gene3D AP2/ERF domain 103 163 IPR036955 GO:0003700|GO:0006355
Lele37g0933 227 SMART rav1_2 104 168 IPR001471 GO:0003700|GO:0006355
Lele37g0933 227 MobiDBLite consensus disorder prediction 41 63 - -
Lele37g0933 227 FunFam Ethylene-responsive transcription factor 2 103 163 - -
Lele37g0933 227 PANTHER DNA-BINDING DOMAIN 52 207 IPR044808 GO:0003700|GO:0009873
Lele37g0933 227 CDD AP2 104 164 IPR001471 GO:0003700|GO:0006355
Lele37g0933 227 MobiDBLite consensus disorder prediction 1 24 - -
Lele37g0933 227 MobiDBLite consensus disorder prediction 165 227 - -
Lele37g0933 227 SUPERFAMILY DNA-binding domain 104 163 IPR016177 GO:0003677
Lele37g0933 227 ProSiteProfiles AP2/ERF domain profile. 104 162 IPR001471 GO:0003700|GO:0006355
Lele37g0933 227 Pfam AP2 domain 104 154 IPR001471 GO:0003700|GO:0006355
Lele37g0933 227 MobiDBLite consensus disorder prediction 186 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0933 Lele-ChrLele37 19197692 19198375 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0933 35 196 AP2-EREBP Transcription Factor Family AT2G44840 50.000 3.52e-39 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele37g0933 AP2 5.5e-14 CL0081