Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0906 ATGGATGATATAGTGTATAGCTTGACGCTGTTCTTCGCTGTAATCCTTATAACCTGTCTCCTCTCAGTAATATCATATCGTTGCACCACACAGTCCAACGCAGCAAGCCAGCAATCACAAGGGGTTGATCGCAGTAATATTGATGCTGTTATAGACTCGAACCAGACGACGACGGTGACGGTGACGGTGACGGTGGAGCCATGCCTGCCGGATCATCAAACTAGGGTTTGCAGCTGCCACGACGATAACCCAGAGCTTCTCTGCGGTTCAAAAGCCAATAAGTTGTGTGATGATAAAGATGATGAAGGTGGTATTTCAAGTAGCCCTAGTTGCTGCTCAATATGCTTGATGGATTACAAAGAATCTGATATCTTGCGAGTTTTGCCCGAATGCGGTCATTTCTTTCATGTCAACTGTGTTAATCCTTGGATCATATTGCATTTGACCTGCCCTATTTGTAGGAGTTTAGTAAAGAATTTTTAA 483 0.4389 MDDIVYSLTLFFAVILITCLLSVISYRCTTQSNAASQQSQGVDRSNIDAVIDSNQTTTVTVTVTVEPCLPDHQTRVCSCHDDNPELLCGSKANKLCDDKDDEGGISSSPSCCSICLMDYKESDILRVLPECGHFFHVNCVNPWIILHLTCPICRSLVKNF 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0906 160 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 3 156 IPR045899 -
Lele37g0906 160 SMART ring_2 112 153 IPR001841 -
Lele37g0906 160 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 158 IPR013083 -
Lele37g0906 160 SUPERFAMILY RING/U-box 111 158 - -
Lele37g0906 160 Pfam Ring finger domain 112 154 IPR001841 -
Lele37g0906 160 ProSiteProfiles Zinc finger RING-type profile. 112 154 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0906 Lele-ChrLele37 18944907 18945389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0906 1 155 C3H Transcription Factor Family AT5G06490 30.857 2.46e-21 84.0