Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0885 ATGCTCCCAACAAGAAGAAGCCTAGTGATTGCAGACTTGGGTTGCTCTTCTGGTCCAAACACTTACTTTGTGGTTTGTCAAGAGCTAAACCATGAATCTCCAGAATACCAAGTCATCTTGAATGATCTTCCAGGGAATGACTTCAACAGCATCTTCAGGTCTCTTGACAACTTCAAAGAGAAACTCAATCAAGAAATGGTTTCTAGGGTTGGCCCTTGCTTTTTATCAGGTGTACCTGGTTCCCTTTATGGCAGATTGATTCTTCCAAAAAGTCTCCATTTTGTGCATTCTTCTTACAGCCTTCAATGGCTATCTCAGGAACCATTGGGATATGAAACATGTGGGGACTGCCCAGGTAGAAACATCTTGGAATGTTACGTTTGGAAGATATATGTAGGACCACAGATAATGAATCTGGGATATAGAAAGAGAGCAGCATATCATGCACGTACCGACCCAACAATTCAGACAGTTGCAAATATAAGAATATCAACCTCGAACGGCGGCAAGAGGCTTCACTCGAACGGCTCGTTTCTAGGGTTCTTCCAATCCCTCTCAACCTCATCGGAAGAGTACGAAAATGGTACTCCATCTTCCCCTCATTCTGTCTTTCTCTTTATGTTGTTTTCTACATTAGCCTGCAGCTTGCATTTGTTCAGCGTTTGTAGGAAGATGGTTTTGAGAAAGAACACAAACATTTTTACAATGTTGGCAACGAAGAGAACCAAGAAGGCCGGTATTGTTGGGAAATATGGCACCCGATATGGTGCTAGTCTTAGGAAGCAAATTAAGAAGATGGAAGTGAGTCAGCACAGCAAATACTTCTTTAAGAGGAAGGCTGTCGGTATATGGGGCTGCAAAGATTGTGGAAAAGTGAAAGCTGGAGGTGCCTACACATTGAACACTGCAAGTGCGGTGACAGTCCGTAGCACCATAAGGAGGTTGAGAGAGCAGACTGAGAGTTAA 966 0.4327 MLPTRRSLVIADLGCSSGPNTYFVVCQELNHESPEYQVILNDLPGNDFNSIFRSLDNFKEKLNQEMVSRVGPCFLSGVPGSLYGRLILPKSLHFVHSSYSLQWLSQEPLGYETCGDCPGRNILECYVWKIYVGPQIMNLGYRKRAAYHARTDPTIQTVANIRISTSNGGKRLHSNGSFLGFFQSLSTSSEEYENGTPSSPHSVFLFMLFSTLACSLHLFSVCRKMVLRKNTNIFTMLATKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFFKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0885 321 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 6 114 IPR029063 -
Lele37g0885 321 Pfam Ribosomal L37ae protein family 241 317 IPR002674 GO:0003735|GO:0005840|GO:0006412
Lele37g0885 321 PANTHER ZGC:171772 226 320 - -
Lele37g0885 321 Gene3D - 238 321 IPR011331 GO:0003735|GO:0005840|GO:0006412
Lele37g0885 321 SUPERFAMILY Zn-binding ribosomal proteins 247 311 IPR011332 GO:0006412
Lele37g0885 321 Pfam SAM dependent carboxyl methyltransferase 5 112 IPR005299 GO:0008168
Lele37g0885 321 Gene3D Vaccinia Virus protein VP39 5 105 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0885 Lele-ChrLele37 18689512 18694995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0885 239 321 Cytoplasmic Ribosomal Protein Gene Family AT3G10950 85.714 9.17e-47 151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0885 37 18689512 18694995 Lele39g0526 39 4549218 4551043 hybridization
Lele37g0885 37 18689512 18694995 Lele40g0762 40 17896291 17901053 hybridization