Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0883 ATGCATTATTGGCCTTACTGTAATTTTATATCAGTAAGTGATTGTTGGTATATTATGATTGCGAATATTCTTTATGAACTTGATTCATGCGGTGTGGCGGTAGCATCTGATGCGCCAGTCACAAATGCAGCTGCCAAGTCATATGAACCCTCGTCTGTACAGAAGAGCACCAGAGTTGTTCCGAAAGCTTCAACTCCTCGACCTACCACTATGAATTCTGATACTGCAGCTCCTACAACCCCTACCAAGGGTTTGGTATTTCTGCATGCTTTGTGCTTGATTCCTGCCCGCACAAGCTCAGATCCTCCAAATTTGGACGAGCAGAAAAGAGATCAGGCGCATCATGATTCTTTTAGACCTGTGCCTTCAGTGCCTACACCTCCAAAGCAGCTACCTCCAAGGAATGATGGTGGTGTTATTGCCCAATCTAATGCTGGGGAGGCTCATTCAGTAAGCAAGTTGAAAAAGGAGGAGCAGGCGTCAGTTTTGGCCCCATCAAGCCAGGTACAAAAGCCATCTGTTCTCATGACTGGGATTTCAATGGCAATGCCATATCATCACCAATCACAGGCACCTGTACAGTTTGATGGTCCTACTCCACAGATTCAATCTCAGGGAATGCCAGCAGCATCGCTTCAGATGCCTATGGCAATGCCTTTACCAACGGGAAATGTTCCACAAGTACAACAACAGGTTTTTGTTCCAGGTCTTCAACCTCTTCCTATTCATCCTCAGGGAATTATGCATCAAGGCCAAAACTTGAGTTTCACTCCTCAAATGGGTCCTCAGTTGCCCCATCAGTTAGGTAACATGGGTATTAACATGAGCCCACAATATTCCCTGCAGCAAGGAGGAAAATGTGCTGGTCCTCACAAAACTACCGCTGTTAAGATTACTCATGGTGAGAAACATGAAGAGCTGAGGCTTGACTTTGACAAAAAGGCAGATTCAGATTCAGATGGCGTGACCTCAGGTGCTATGTCTTATCCTAATGTTCCTTCTCAGGCTCAACCTGTTCAATCATTTGCTGCTTCTCATCCCCTCAACTTTTTTCCATCTAGCACTTACAGTAGCGGCTGTCTTTTTTTGCCGCCGAGTTCTGTTCCTTTATCTAGCAGCCATATGACTCCTGGTGGTGAGAGGTGGCAACGAGCGACTAACTTCCAGCAGAGGGGTTTAATTCCTTCTCCTCAAACCCCACTGCAGGTGATGCATAAAGCTGAGAAGAAGTATGAGGTGGGTAAGGTGACAGATATGGAACAAGCGAAGCAGAGGCAGTTGAAAGCCATTTTGAAGAAGTTAACCCCTCAGAATTATGAGAAACTTGTTGAGCAGGTAAAAGCAGTTAATATTGACAATGCTGTCACTCTTACTGGTGTAATCTCTCAAATATTTGAGAAGGCTCTAGTGGAGCCTTTCTTCTGTGAAATGTATGCCAATTTCTGCTTACATCTAGCTTTTGAGTTGCCTGATTTCAGTGAAGACAATGAAAAGATAACTTTTAAGAGATTATTGTTGAACAAGTGCCAAGAGGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAAGCTAATAAACATGATGAGGGTGATGTCAAGCAGACAGATGGAGAGAGGGAAAAGAAACGAGTTGAGGCAAGACGGCGCATGTTAGGTAATATAAGATTGATTGGAGAGTTATATAAGAAAAAAATGTTGACTGAGAGGATAATGCATGAGTGCATCAAGAAGTTACTGGGATCGTATCAGGACCCTAATGAGGATGATATTGAAGCTTTATGCGAGCTGATGAGTACTATTGGGGAGACGATTGATCATCCCAAAGCCAAGGAACACATGGATGCATATTTTGAAAGGATGAAGTCGTTATCAAACATGAATTTATCTTCTCGAGTTAGATTCATGTTGAAGGACGCTATTGATTTGAGAAAGAATAAATGGCAACTGAAGCGAAAAGTTGAAGGTCCAAAGAAGATTGAGGAGGTGCATAGAGATGCTGCCCAAGAGAGGCAGGCCCAAAGTGGCCGGCTAGGTCATGGTCCAGGCAATAAATCATCAAGAAGGATGCCTATGGAGCTTTGTCCTATAGAGCCGTCTATATTTTCTCCTCCTAATAGCCCTATGGGGATGCGTGGGCTTTCTGCACAGGTTCGCAGTGGTGGTTCTAAGGATGTTTGCAACAATGATAGACTATCATATGAGGCTAGAAATTTGTCTGTTCCTTTTCCTCTGAGACCTTTAGGTGATGATTCTATAACTTTGGGACCACAAGGTGGTCTTGCAATAGGAATGTCCTTTAGAGGGCCAGCTGTAATTCCAAATTCTGCTGTTCCTGATGTGCTCCCAGTTTCTACAGGTTCTCGAAGAATGACGTTTGGCCTTAATGGTTATGGCAATTCGTCAGAGTGTGTTCTGTACAGCGGTAGAGAAGATCTCATGCCAAGATATTCTACGGATAGATTTGGTGGTACAACTGCTCATGACCAATCAGCTGTTCAGGATTGTAATATTAATTATGGCAATAGGGAGTTGAGAAATGCAGGCCGGGTTCTTGAGAGACCTGTTGCAACTTTACCTCCTGGAGTGCAAGGATCTGGAGTCTCCGAGAATGCTTCTTCAGAGATGGTTTGGCCAGAAGGACGACTGCAGGACATGTCCATGGCTGCAATTAAAGAATACTACAGTTTGTTGGTTGGGACTTGGGACTGCTTTACTTTGACTTTCCTGAAGGATGCAGGAGTTAATGCTGCTTATGTTTTTTTCCAACCATTTGCTAGAGATGTAAAAGAAGTTGCGTTGTGTGTCAAAGATCTAAACTCTCCAAGCTATCATCCTTCGATGATTTCTCTATGGGTCACGGACTCCTTTGAGAGAAAGGACACGGAAAAATATCTTTTGGTCAAATTACTAGTGAGCCTTACGCAAAATGGCACCTTGAGTCAGGCTCAGCTTATCCATGGATTCGAATCTGTTCTAAGTGGTCTGGAAGATGCCGTTAATGACGCTCCTAGAGCCCCCGAATTTGTAGGCCGAATCTTTGCTAGAGTTGTGATTGAAAATGTTCTCTCTTTGAAAGAGATCGGCCAACTATTACATGAAGGCGGAGAGGAGCCAGGCCAACTCTTGGAAATCGGACTGGCAGCCGATGTTCTTGGAAGCACATTGGAAGCAATAAAAATGGAGAAGGGGGATGCTGTTGAGTGA 3201 0.4402 MHYWPYCNFISVSDCWYIMIANILYELDSCGVAVASDAPVTNAAAKSYEPSSVQKSTRVVPKASTPRPTTMNSDTAAPTTPTKGLVFLHALCLIPARTSSDPPNLDEQKRDQAHHDSFRPVPSVPTPPKQLPPRNDGGVIAQSNAGEAHSVSKLKKEEQASVLAPSSQVQKPSVLMTGISMAMPYHHQSQAPVQFDGPTPQIQSQGMPAASLQMPMAMPLPTGNVPQVQQQVFVPGLQPLPIHPQGIMHQGQNLSFTPQMGPQLPHQLGNMGINMSPQYSLQQGGKCAGPHKTTAVKITHGEKHEELRLDFDKKADSDSDGVTSGAMSYPNVPSQAQPVQSFAASHPLNFFPSSTYSSGCLFLPPSSVPLSSSHMTPGGERWQRATNFQQRGLIPSPQTPLQVMHKAEKKYEVGKVTDMEQAKQRQLKAILKKLTPQNYEKLVEQVKAVNIDNAVTLTGVISQIFEKALVEPFFCEMYANFCLHLAFELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKHDEGDVKQTDGEREKKRVEARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGSYQDPNEDDIEALCELMSTIGETIDHPKAKEHMDAYFERMKSLSNMNLSSRVRFMLKDAIDLRKNKWQLKRKVEGPKKIEEVHRDAAQERQAQSGRLGHGPGNKSSRRMPMELCPIEPSIFSPPNSPMGMRGLSAQVRSGGSKDVCNNDRLSYEARNLSVPFPLRPLGDDSITLGPQGGLAIGMSFRGPAVIPNSAVPDVLPVSTGSRRMTFGLNGYGNSSECVLYSGREDLMPRYSTDRFGGTTAHDQSAVQDCNINYGNRELRNAGRVLERPVATLPPGVQGSGVSENASSEMVWPEGRLQDMSMAAIKEYYSLLVGTWDCFTLTFLKDAGVNAAYVFFQPFARDVKEVALCVKDLNSPSYHPSMISLWVTDSFERKDTEKYLLVKLLVSLTQNGTLSQAQLIHGFESVLSGLEDAVNDAPRAPEFVGRIFARVVIENVLSLKEIGQLLHEGGEEPGQLLEIGLAADVLGSTLEAIKMEKGDAVE 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0883 1066 MobiDBLite consensus disorder prediction 516 543 - -
Lele37g0883 1066 Pfam MA3 domain 925 1021 IPR003891 -
Lele37g0883 1066 FunFam Eukaryotic translation initiation factor 4G 424 658 - -
Lele37g0883 1066 Gene3D - 424 658 - -
Lele37g0883 1066 FunFam Eukaryotic translation initiation factor 4G 903 1066 - -
Lele37g0883 1066 Gene3D - 919 1065 - -
Lele37g0883 1066 MobiDBLite consensus disorder prediction 660 688 - -
Lele37g0883 1066 Pfam MIF4G domain 424 645 IPR003890 GO:0003723|GO:0005515
Lele37g0883 1066 SMART if4_15 424 645 IPR003890 GO:0003723|GO:0005515
Lele37g0883 1066 MobiDBLite consensus disorder prediction 103 117 - -
Lele37g0883 1066 ProSiteProfiles MI domain profile. 907 1031 IPR003891 -
Lele37g0883 1066 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 52 1065 IPR045208 GO:0003743
Lele37g0883 1066 SUPERFAMILY ARM repeat 420 647 IPR016024 -
Lele37g0883 1066 Coils Coil 506 526 - -
Lele37g0883 1066 MobiDBLite consensus disorder prediction 49 79 - -
Lele37g0883 1066 SUPERFAMILY ARM repeat 925 1062 IPR016024 -
Lele37g0883 1066 MobiDBLite consensus disorder prediction 98 151 - -
Lele37g0883 1066 SMART ma3_7 912 1022 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0883 Lele-ChrLele37 18668527 18673361 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0883 52 376 Eukaryotic Initiation Factors Gene Family AT3G60240 40.233 3.11e-51 196
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0883 37 18668527 18673361 Lele37g0883 37 18668527 18673361 ECH
Lele37g0883 37 18668527 18673361 Lele39g0528 39 4568026 4576897 hybridization
Lele37g0883 37 18668527 18673361 Lele40g0760 40 17866642 17868126 hybridization