Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0881 ATGTATTGCTTTCACTACTTCACCAGACACAGGAGGCGAAGATCATCAGAATCTGAGCTTAAAGAAGAATTGAAGTCCCAAAACTCTGAGGTCAATAGAATCACCAAATCGTCGTCGGAATCCACCTCGCAGCGTGGGATTCCAGAATTGTATGAAGAGAAGGCTCACAATTTGCGGGTTTTCTCCTTCGCTGAACTCCAGCGAGCGACAAATAATTTCAGTAGGCTTTTGAAGATTGGTGAAGGTGGGTTTGGTAGTGTCTATAAGGGTTCAATCCAGGTCACTGATAATAAGGAGTTTGTTTCGGTTGCCGTCAAAAGGCTTGACCCTGATGGATTTCAGGGTCATAAGCAATGGTTCGCTGAAGTTCAGTTTCTGGGTGTTGTGGAGCACCCAAATCTTGTGAAACTCATCGGATATTGCGCTGTGGATACTGAAAGAGGGATCCAGAGACTTCTTGTATATGAATACATGCCGAATAAAAGCTTGGAATATCATCTTTTTAACAAAGTATATGATCCTCTTCCTTGGAAAACAAGACTTGAAATAGCACTTGGAGCAGCTCAAGGGTTAGCTTATCTCCACGAAGAATTAGAAGTTCAGGTGATATATAGAGATTTTAAAACCTCAAACGTATTACTGGACGAAAATTTTAGGCCAAAACTTTCTGATTTTGGACTTGCTAGGGAGGGGCCAATAGCTGGGCACACTCATGTTTCAACTGCAGTGATGGGAACATATGGCTATGCTGCTCCCGATTACATTGAGACAGGCCATCTCACTACAAAGAGTGATGTATGGAGTTTTGGTGTGGTTCTCTATGAAATTCTTACTGGGAGGCGATCGCCGGATCGAAACCGGCCAAAGATGGAGCAGAAACTCTTGGAGTGGGTGAAACAGCATCCTACTAACAGAAGGAGGTTCAGCTTGATAATTGATCCTAGACTTGAAGGCCAGTATTCCATAAATGGAGCACGAAATATAGCCAAGCTCGCAGATGATTGTCTGAGCAAAACTGCGAAAGCGCGACCGAGGATGAGTCGGGTGGTGGAGAGATTGAAGCAAATAATCATGAATTCAGATGAAGATAATAATAATCCTCCTAAAGAGAAAAATATTAATCTGTTTGAAAATGATGATTTGCTTGATGAAGAAGAAAAGCCAAATCAACCAAACCCTTCAACGTTGTGGCAAAGGAGGATGGCACATCTTGCAAAACTTGGTGAGCATGCAGAGACTGCTATAGGACGAAAATTTATGATCCTCCAAAAGGCCAAATCTGGTTTTTAG 1290 0.4248 MYCFHYFTRHRRRRSSESELKEELKSQNSEVNRITKSSSESTSQRGIPELYEEKAHNLRVFSFAELQRATNNFSRLLKIGEGGFGSVYKGSIQVTDNKEFVSVAVKRLDPDGFQGHKQWFAEVQFLGVVEHPNLVKLIGYCAVDTERGIQRLLVYEYMPNKSLEYHLFNKVYDPLPWKTRLEIALGAAQGLAYLHEELEVQVIYRDFKTSNVLLDENFRPKLSDFGLAREGPIAGHTHVSTAVMGTYGYAAPDYIETGHLTTKSDVWSFGVVLYEILTGRRSPDRNRPKMEQKLLEWVKQHPTNRRRFSLIIDPRLEGQYSINGARNIAKLADDCLSKTAKARPRMSRVVERLKQIIMNSDEDNNNPPKEKNINLFENDDLLDEEEKPNQPNPSTLWQRRMAHLAKLGEHAETAIGRKFMILQKAKSGF 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0881 429 SUPERFAMILY Protein kinase-like (PK-like) 55 353 IPR011009 -
Lele37g0881 429 CDD STKc_IRAK 79 356 - -
Lele37g0881 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Lele37g0881 429 PANTHER OS01G0588500 PROTEIN-RELATED 33 356 - -
Lele37g0881 429 Gene3D Transferase(Phosphotransferase) domain 1 158 380 - -
Lele37g0881 429 MobiDBLite consensus disorder prediction 18 47 - -
Lele37g0881 429 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g0881 429 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 47 157 - -
Lele37g0881 429 ProSitePatterns Protein kinases ATP-binding region signature. 79 106 IPR017441 GO:0005524
Lele37g0881 429 Pfam Protein tyrosine and serine/threonine kinase 78 353 IPR001245 GO:0004672|GO:0006468
Lele37g0881 429 Gene3D Phosphorylase Kinase; domain 1 45 157 - -
Lele37g0881 429 FunFam PTI1-like tyrosine-protein kinase 3 158 367 - -
Lele37g0881 429 Coils Coil 17 37 - -
Lele37g0881 429 MobiDBLite consensus disorder prediction 30 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0881 Lele-ChrLele37 18632768 18635673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0881 1 353 Glycoside Hydrolase AT3G07070 45.429 2.83e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele37g0881 PK_Tyr_Ser-Thr 5.2e-46 CL0016