Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0861 ATGGAGTTTCACAAACTCGAAATCCTCAAAACTAACAGTGACCAAGTCGTCATCAACATGGATCTGCAACAACAACAACACCAAAACCCTAAACAAGATTATCCTCCTCAATCCTATAATCATCCCAGAAACAGAACACTCCAACGCCTCAATTTTTCCAAACCAAGATCACGTTTTGAGGAAATCAACTACCCTATCCCAACGCCCAAACCAACCTACAATCCCATGCCTGAATCAGATGATCATAGCCAGCCCTTGAGTTCGCAAACAGAAAACCCTACTAACTACTCTTCCACTGAAGAAGACGACGACGACGAATGGTTTGAAAACGGAGACGACGCAGCCGACGAAGCCACCGGTAAGTGCAGAAAGAGGAAGAAGAAGATCAACAAGAGGGCCTTACTGGAATGGACTTTGTTCCTCATCATCATGACTTGCCTGGTATGTTCTCTCACTATTAAATCCCTCGAACACAAGACTCAGTGGAGCTTAGAATTCTGGAAATGGTGTTTGCTGGTGATGGTAATCTTCTGTGGCCGTCTCGTCTCCGAATGGGTAGTCCGAATCCTCGTTTTTCTCATTGAACGCAACTTCATGTTGAGAGAGAAAGTTCTCTACTTCGTTTACGGTCTTCGAAAGAGTTTTCAGAACTGTGTGTGGCTTGCCCTAGTTTTGATCGCATGGATGATTATGTTCCATGACGCTCATAACAAAAACAAAGTCCTCAAGAAGTTCTTCAGGGCTCTCGTCGCCATCCTCGTTGGCGCCACCATATGGTTACTAAAAATAGTGTTCGTTAAGGTTCTTGCGTCGTCGTTCCACGTCGCGGCTTTCTTTGACAGAATGAAAGAGAGTGTTTTCCATCACTATGTCTTGGAGGCACTCTCTGGCCCGCCGTTGGACGAGGAGGAGATGGACCTGCCTTGGCGGCACTTGCAGGCGTCGAAGACGATGCCGGCGAGGCTGAGGTACGAGAAGTCTCAGCAGTTGAAGTCGAGATCGAGGAAGGGAGATGGGTCGAGGAGGATCGACATAGAGAAGCTGAAAAGGCTGAGCATGGACGGGAGAGCGACGGCGTGGAGTGTGAAGAGGTTGGTGAGCTACGTGATGTCGTCGGGATTGTCGACGATTTCGAGGACGGTGGACGATTTTGCCAACGCCGAGTCGGAGATTAATAGCGAGTGGCAGGCTAGGACTTGTGCTCAGAGGATATTCAAGAATGTTGCAAAGGATGGAGCCAAGTACATAGAAGAAGAAGATTTACTGAGATTCTTGAAGAGAGACGAAGTGTACATGATATTTCCTTTATTTGGAGGAGCACTTGAAACTGGAAAAATTACCAAGTCCTCATTTCGAAATTGGTTGGTGCATGCATACGTAGAGAGAAAAGCGTTGGCACATTCATTGAACGATACTAAAACGGCAGTTCGTCAACTGCACAAACTGGCGAGTGCAATTGTAATAGTGATAATTACAGTGATGTCTCTCTTGGTGATGGGTTTGGCCACAACTAAAGTCATCTTTGTCGTCACTTCTCAACTCTTGCTCGTAGGTTTTGTGTTTCAAAATATGTGCAAAACTGTCTTTGAATCCATCATCTTCGTCTTCATCATGCACCCTTTTGATGTCGGAGATCGCTGTGTCATTGATAGCATTCAGATGATTGTGGAAGAGATGAATATATTGACAACAGTGTTCTTAAGATATGATGGTGAAAAAATATATTATCCGAATTCAGTTCTGCTGACGAAACCTATAAGCAATTTCAGAAGGAGCCCTGATATGGCTGACGCTGTGGAATTCACTATTGACGCCTCTACCTCTACCGACAATCTATGTGCCCTCAAGAAAGCCATTCAAGCGTACATTGAGAGCAAATCCAAGTACTGGAATCCAAAACACGTAGTGATAGTGAAGGAGATAGAGAACATGGACAAGATGAAGATGGCTCTCGCTGTTCAACACACCATTAACCATCAAAACTATGGCGAGCGAAACGGCCGTCGATCGGAGCTTTTGCTCGAGCTGAAGAGGATCTTCGAGAGCCTTGGCATCAAGTATCGTCTTCTTCCTCAAGAAGTACATCTCACGCAGGTTAACTTTGGCAACAATAATAGTGGAGCCTTCCCACTTTCATCCAAATCCTTCTGA 2151 0.4542 MEFHKLEILKTNSDQVVINMDLQQQQHQNPKQDYPPQSYNHPRNRTLQRLNFSKPRSRFEEINYPIPTPKPTYNPMPESDDHSQPLSSQTENPTNYSSTEEDDDDEWFENGDDAADEATGKCRKRKKKINKRALLEWTLFLIIMTCLVCSLTIKSLEHKTQWSLEFWKWCLLVMVIFCGRLVSEWVVRILVFLIERNFMLREKVLYFVYGLRKSFQNCVWLALVLIAWMIMFHDAHNKNKVLKKFFRALVAILVGATIWLLKIVFVKVLASSFHVAAFFDRMKESVFHHYVLEALSGPPLDEEEMDLPWRHLQASKTMPARLRYEKSQQLKSRSRKGDGSRRIDIEKLKRLSMDGRATAWSVKRLVSYVMSSGLSTISRTVDDFANAESEINSEWQARTCAQRIFKNVAKDGAKYIEEEDLLRFLKRDEVYMIFPLFGGALETGKITKSSFRNWLVHAYVERKALAHSLNDTKTAVRQLHKLASAIVIVIITVMSLLVMGLATTKVIFVVTSQLLLVGFVFQNMCKTVFESIIFVFIMHPFDVGDRCVIDSIQMIVEEMNILTTVFLRYDGEKIYYPNSVLLTKPISNFRRSPDMADAVEFTIDASTSTDNLCALKKAIQAYIESKSKYWNPKHVVIVKEIENMDKMKMALAVQHTINHQNYGERNGRRSELLLELKRIFESLGIKYRLLPQEVHLTQVNFGNNNSGAFPLSSKSF 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0861 716 PIRSF Memb_At2g17000 9 711 IPR016688 -
Lele37g0861 716 MobiDBLite consensus disorder prediction 97 112 - -
Lele37g0861 716 MobiDBLite consensus disorder prediction 24 112 - -
Lele37g0861 716 Pfam Mechanosensitive ion channel 481 686 IPR006685 GO:0016020|GO:0055085
Lele37g0861 716 FunFam Predicted mechanosensitive ion channel 540 589 - -
Lele37g0861 716 SUPERFAMILY Sm-like ribonucleoproteins 530 589 IPR010920 -
Lele37g0861 716 MobiDBLite consensus disorder prediction 24 53 - -
Lele37g0861 716 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 26 700 IPR016688 -
Lele37g0861 716 Gene3D - 540 589 IPR023408 -
Lele37g0861 716 MobiDBLite consensus disorder prediction 77 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0861 Lele-ChrLele37 18406779 18412854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0861 35 700 Mechanosensitive Ion Channel Family AT5G12080 44.986 0.0 589