Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0857 ATGGCCGGCCTTGACTTAGGTTCAGCATCTCACTTTGTTCATCAGCTTCAACGCCCTGATCTTCACTCCAATAATCATGAAGATGGCAACCGGGAGGACCACGACGACGATGACCCTCAAGGGCATGAGCTAGTTACTCCGAACTCGGGAGGATCTGGCGGTGGCGATGGTAGCGGTCGCCGGCCAAGGGGTCGGCCTCCTGGCTCGAAGAACAAGCCGAAGCCGCCGGTGATCATCACTAGAGAAAGTCCAAACACGCTTAGGGCTCATATCCTTGAAGTTAGCAGCGGCTCCGATGTGTTTGACTCAGTGGCGACCTATGCGAGGAAGCGGCAGCGAGGGATCTGTGTCCTAAGCGGCAGTGGCACCGTCACCAACGTGACGTTACAGCAGCCAATGGCTGCCGGTGCTGTTGTGACCTTGCACGGGAGGTTTGAGATATTGTCCTTGGCTGGATCTTTTTTGCCCCCTCCAGCTCCGCCGGGCGCCACCAGCCTGACGATATTTCTCGCCGGCGGGCAAGGTCAAGTTGTGGGAGGAAATGTTATTGGTGCCTTGATAGCTGCTGGACCTGTTATTGTTATTGCGTCCTCATTTTCAAACGTAGCATATGAGAGGTTGCCCTTAGATGAAGAAGAACCCCTACAGATGCAACAAGGTCAATCTTCCGGCGGTGGCGGTGGAGGCGGCGGCAACTCGTTCCCAGACCCATCTTCAGGGCTGCCGTTCTTTAATCTGCCGTTAAACATGCCGCAGTTACCGGTTGACGGTTGGGCTGGAAACTCAGGTGGGGGTGGTAGGCAACCATATTGA 813 0.5547 MAGLDLGSASHFVHQLQRPDLHSNNHEDGNREDHDDDDPQGHELVTPNSGGSGGGDGSGRRPRGRPPGSKNKPKPPVIITRESPNTLRAHILEVSSGSDVFDSVATYARKRQRGICVLSGSGTVTNVTLQQPMAAGAVVTLHGRFEILSLAGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVIGALIAAGPVIVIASSFSNVAYERLPLDEEEPLQMQQGQSSGGGGGGGGNSFPDPSSGLPFFNLPLNMPQLPVDGWAGNSGGGGRQPY 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0857 270 ProSiteProfiles PPC domain profile profile. 84 221 IPR005175 -
Lele37g0857 270 FunFam AT-hook motif nuclear-localized protein 87 214 - -
Lele37g0857 270 SUPERFAMILY AF0104/ALDC/Ptd012-like 84 215 - -
Lele37g0857 270 CDD DUF296 88 199 IPR005175 -
Lele37g0857 270 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 24 225 IPR014476 GO:0003680
Lele37g0857 270 Gene3D - 87 221 - -
Lele37g0857 270 MobiDBLite consensus disorder prediction 213 247 - -
Lele37g0857 270 MobiDBLite consensus disorder prediction 1 84 - -
Lele37g0857 270 Pfam Plants and Prokaryotes Conserved (PCC) domain 88 201 IPR005175 -
Lele37g0857 270 MobiDBLite consensus disorder prediction 20 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0857 Lele-ChrLele37 18342362 18343174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0857 1 270 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 57.895 8.85e-96 281