Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0839 ATGGATACCACAGCCTCTTCTTCTTCTTTTTCTTCATCTTCTTCTTCATCATCAACGTCAACATCAGAAACAGATTCATGTTTGAAATTCAAGCATGATCAGTCTGAAAGTGATGATCTGAATGGGAAGCAACAGAAAAGCGAGAAGAACAAGAGACAGAGAAGTGAGAGTTATGATAATAATAATTCTGAAGGGAATGATAATAAGCATTGTACTTACAGAGGTGTGAGAATGAGGGCTTGGGGAAAATGGGTTTCTGAGATTCGTGAGCCCAGAAAAAAGTCAAGAATATGGCTTGGAACATTTCCTACTGCCGAAATGGCGGCTCGAGCCCATGATGTAGCCGCTTTAGCAATCAAAGGCCAATCGGCTTACCTCAATTTCCCAGAACTCGCTAACCAGCTTCCCCGGCCCGCCAGCTCGGCTCCTAAAGACATCCAGGCAGCGGCCGCAAAGGCGGCGGCAGCCACCACCACATCCGATGAGGTCAAACACTGTCAAGCCGAGGCTGAAGCCGGAGGAGCCAAGCCGAGCAACGGAGAGCAGGCCACTTCTTCTTCTTCATGTTCTGTTCCTGAGGACGAAGACGCATTGTTTGATCTTCCAGATCTCTTCACTGATGAGGACATTAATGGAGTCTTCTCGTATTCTTCTTGGAATTTATGTGCAGTAGTTGATAGTGATGGTTTAAGGCTTGATGAGCCTTTTTTATGGGATAAATATTAA 726 0.4559 MDTTASSSSFSSSSSSSSTSTSETDSCLKFKHDQSESDDLNGKQQKSEKNKRQRSESYDNNNSEGNDNKHCTYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALAIKGQSAYLNFPELANQLPRPASSAPKDIQAAAAKAAAATTTSDEVKHCQAEAEAGGAKPSNGEQATSSSSCSVPEDEDALFDLPDLFTDEDINGVFSYSSWNLCAVVDSDGLRLDEPFLWDKY 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0839 241 MobiDBLite consensus disorder prediction 1 72 - -
Lele37g0839 241 Pfam AP2 domain 72 121 IPR001471 GO:0003700|GO:0006355
Lele37g0839 241 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Lele37g0839 241 PRINTS Ethylene responsive element binding protein signature 95 111 IPR001471 GO:0003700|GO:0006355
Lele37g0839 241 MobiDBLite consensus disorder prediction 1 25 - -
Lele37g0839 241 SMART rav1_2 72 135 IPR001471 GO:0003700|GO:0006355
Lele37g0839 241 MobiDBLite consensus disorder prediction 26 58 - -
Lele37g0839 241 Gene3D AP2/ERF domain 72 130 IPR036955 GO:0003700|GO:0006355
Lele37g0839 241 ProSiteProfiles AP2/ERF domain profile. 72 129 IPR001471 GO:0003700|GO:0006355
Lele37g0839 241 CDD AP2 71 131 IPR001471 GO:0003700|GO:0006355
Lele37g0839 241 MobiDBLite consensus disorder prediction 178 192 - -
Lele37g0839 241 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 49 210 - -
Lele37g0839 241 FunFam Ethylene-responsive transcription factor 2 71 130 - -
Lele37g0839 241 SUPERFAMILY DNA-binding domain 72 130 IPR016177 GO:0003677
Lele37g0839 241 MobiDBLite consensus disorder prediction 169 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0839 Lele-ChrLele37 18078091 18078816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0839 68 237 AP2-EREBP Transcription Factor Family AT2G44940 53.731 2.02e-60 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele37g0839 AP2 1.2e-13 CL0081