Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele37g0831 | ATGAACTATCAACAGAGGCTCCAAGTTGCGGCGAAAATCATTCTTGAACATGACGCATGCGACGCCGACGCGCCGCTTAACGTCCAAGAGCTTGGGATCAAGGCGACCCTTAAACCTCACCAAGTGGAGGGTGTTTCGTGGCTCATACGAAGATATAAACTTGGCGTCAACGTTCTCCTCGGGGATGAGATGGGACTGGGCAAGACATTGCAAGCTATCTCCTTATTGAGCTATTTAAAAGAGTGCCAGTTGTCAGTTGGACCATCTTTGGTTTTATGTCCTCTAAGTGTAACAGATGGTTGGGTTTCAGAGATTGTTAAATTTTCACCCCAACTAAAAGTAATCAAATATGTTGGAGGGAAAGAAGACAGGTGCTGCCTACGCAGGAATATTCATGAACATGTACAGGGACAGTCAACAGCAGTCAATGTCTTGTTACCTTTTGACGTCCTATTAACAACTTATGATATAGCACTGATCGATCAGGATTTTCTTTCTCAAATACCATGGCAGTATGCAATTATTGATGAAGCTCAAAGACTTAAAAACCCTTCAAGTGTTTTATATAATGTTCTCAAAGAGAGCTATGTCATGCCAAGACGGTTGTTGATGACTGGTACTCCTATTCAGAACAACCTTTCTGAACTGTGGGCATTGATGTATTTTTGTATGCCTTCTATCTTTGGTACACTAGAGCAGTTCCTTTCCACATTCAAGGACATCAGTGATCCTACATCAGTTCAAAATGCTATGAAGGTAAAGGAGCAACTTAAGATACTGAAAAGTATATTAGGAGCTTTTATGCTTCGACGGACCAAGTCAAAGCTTATAGAGAGTGGAACTCTCATGCTACCATCTCTCACTGAGATAACTGTTATGGCACCCCTAGTTGGCCTGCAAAAAAAGGTTTACATGTCAATTTTGAGGAAGGAGCTTCCTAAGTTACTCGCCCTATCTTCTGGAACTTCAAATCATCAGTCTCTGCAGAATATTGTGATCCAGCTAAGGAAAGCATGTAGTCATCCTTATCTTTTCCCGGGTATTGAGCCTGAGCCTTATGAAGAGGGTGAACATCTGGTTCAGGCCAGTGGGAAATTGTTGATCCTGGACCAGCTTCTTCAGAAGTTACATTATTCTGGACATCGTGTCCTTCTTTTTGCTCAAATGACCCAAACACTTGATATATTGCAGGACTTTCTGGAGTTAAGAAAATATTCCTATGTTCGTCTTGATGGGTCAATTAGGGCTGAGGAGCGTTTTGCTGCAATAAGAAGTTTCAGTGGCCCATCAGCTAATTCAGTTTTGAATTCTGAAGCAGACCAAAATGGAGCCTTTGTCTTCTTGATCACAACAAGAGCTGGGGGAGTCGGATTGAATCTTGTGGCTGCTGATTCGGTTGTATTCTATGAGCAAGATTGGAATCCTCAAGTAGACAAGCAGGCATTGCAGCGAGCCCATCGGATTGGCCAGATGAACCATGTATTGTGCATAAACCTTGTTACAGAAAAAACAGCAGAGGAGGTAATCATGCGGAGGGCAGAGAAGAAATTGCAGCTTAGCCTCAATGTTATAGGTGATAATATTCAGGAACATGAAGATGAACAAAAATCTGGAGTTGGGACTGGTGATTTAAAATCCGTCATGTTTGGCCTACATATGTTTGATCCTACTGAAAATAATGATGGAGAGCTTGGGGACTTAGATTTGTCAGAAATTAATGCTATGACTGACAAGGTGATAGCAATGCGTGATGTACATGCATCTGACAAGGATGACAGAAAATTTGAGATCAACCCTGGAAATCTTCTAGAATCATATGACGCTAAGGAAGGAGCTTCTACTTCTTTTAACTCTGATCCTAGTCTTGATGAGGCTTCTTATCTTTCCTGGGTTAAAAAATTCGAGGAACTGTCAAAATTAAGTGGTGACTCAATCATGGAGATGAGGAATAGAGGAATCTTGGATGAGGAAAAGCGTCTAAAACTTGAGGCTGCAAAGAAGAAAGCGGAAGAAAAGAAGCTGTCTAAGTGGGAAGCCCTTGGATACCATTCATTGAATGTGAATGACCCTATCATCCCTCCAGATGGTGGTAATCCATCAGATGCTGGATCTGTTCATTTTGTGTATGGAGATTGTACAGATCCATTGAACGTTTGTCCATCTGAACCTGCCATAATATTCAGCTGTGTTGATGCCTCTGGAAACTGGGGCCGTGGAGGAATGTTTAATGCACTTAACAAGCTTTCTTTGAGCATTGGTGATGCCTATGAAAGGGCTTCTGCACATGGGGACTTGCATCTTGGGGACCTACATCTTATAAAGCTTGAAGATGACTGCGATGAACAAAATATGGATACAACTACTCCCATTTGGGTTGCTTTAGCTGTGGTTCAGTCTTATAATCCAAGGCGTAAAGTTCCTCGGAGTTCGATCTCACTTCCCCACTTGGAGAGTTGCTTATCCAAAGCAGCATTTTCAGCCAAGCAAAATTCTGCATCAATACACATGCCCCGTATAGGTTATCAGGATGGATCAGATCGTTCTGAGTGGTACGCCATCGAGCGTCTTCTACGAAAATATGCTTCCATTTATGGCACCAGCATATATATACTATTATCGTCGACAATCTCAGTAAAGCTTATGATTGATTCAAGTATCAAAGAAGATAGTTGTTGGGAATCATGCTCTGCCTCCAATAATGTATATATTCTTCTCACTTTCTTGAGTGAAACTACTAGCGAGGATGACGAAATGGACAAAGATGATAAACCAAAATCATCCGCCAGATCGAAAACAGCCAAAGTCATGGCTAGGCTTATCAATTACAAACCTTGGTCAAATGAGCTGGCATCCTCTTTATCTTCACTTTGCCCCACTCTGTCGAAAACCATGGTGCTTCAAACTCTTCGTCTTATCTCAAATTCATCCAAAGCCTTTCAATTCTTTAAGTGGGTACACGATATGGGTTTCCCACACAATGACCGATCATACTTCATAATGATAGAAATTTTGGGCCGTGGAAGAAACCTTAATGTAGCTCGGAATTTTTTGTTTTCAATTGAGCTAAGATCCAATGGTGCTGTTAAGCTTAATGATCAGTTCTTTAATGGCTTAATTAGGAGTTATGGTCAAGCTGGGTTGTTTGAAGAGTCGACGAAGCTTTTTCAGACTATGAAGACAATGGGTGTTTCACCATCTGAGATCACATTCAACAGTCTTTTTTCTATATTGCTTAGACGGGGTCGGACGAATATGGCAAACGATCTTTATGATGAAATACTCAGGACGTATGGAGTTGCACCAGACACGTATACATATAATATTTTGATCAGAGGGTTTTGTAAGAACTCCATGGTTGATCAAGGGTTTCGATTTTTCAATGAAATGTCACGCTTCAATTGTGATCCAGATATTGTTACATATAATACACTTGTTGATGGCTTGTGTAAAGCAGGGAAGGTCAAAATCGCACATAATTTAGTGAAGGGTATGAGTAAGAAAAGCAACGATTTGAATCCTAATGTTGTGACTTATACAACTTTAATTAGAGGGTATTGTATGAAACAAGAATTAGATGAGGCCTTGCTTATAATTAAGGAGATGACTACTCAAGGGCTCAAGCTAAACAAAATTACCTACAACACTCTGATAAAAGGACTTTGTGAGGCCCGCAAATTAGATAAGATCAAAGATATTTTGGAACAAACCATAGGGGATGGTCAATTCAGTCCAGACACATGTACCTTCAACACATTAATTCATGCACATAGCAGTGCAGGAAACTTAGATGAGGCATTAAAGGTGTTTGAGGGGATGAAAAACTTGCAGGTCCCCGCAGACTCTGCCACATACAGCGTTCTGCTATGGAGCCTGTGTGCAAGAGAGGACTATGATATGGCAGAAAAGATGTTTGATGAGTTGTATGAGAAGGAAATTTTGTTGAGTAATTTTGGCTCTAAGCCTCTTACTGCTTCGTACAACCCTATGTTTCAGTATCTTTGTGAACACGGGAAAACTAAGAAGGCTGAGAGAGTATTTAGACAGCTAATGAAAAGGGGAACACAAGACCCTCCGTCCTACAAGACAATGGTTATGGGGCACTGTAAGGAAGGTTCTTATGAAGACGGATATGAGCTTTTGAAGTGGATGTTAAGACAAAATTTTCTTCCAGATGTTGAGATATATGATTCTTTGATTCATGGTTTTCTTCAGAAGGAGAAACCTCTTCTTGCAAAAGAGGCACTAGAGAAAATGCTAAGGAGCTCCTATCTTCCCGAAACATTTACTTGGCACTCTATACTGGCAAAGCTTTTGGAAAAAGTTTGTGCCCATGAATCTGCCAGTTTTATAGTCATGATGCTAGATAAAAATATTAGACAAAACATAAAATCTTCAACCATGAGTTTACGGCTACTTTTTGGCCATGGACTGAAGTACAGAGCATTTGAGGTTTTAGAGTTGCTTTACAGGCATGGATACTGTGTTAAAATAGATGAACTAGTTCAGTTTCTTATACACAGAGGAAAGCTATCAGAGGCATGCAAAATGTTGGCATTCTGTTTTGAAAATCATGAAAATGTTGATCTTGATTTGTGCAATGTTGTTATTTTGGGCTTTGTAAAAGGAACTAGGTTTCAGAAGCTTTTGGTTTATGCCATAGAAGCCAAATCTGTTGCTTATGTTATTGCTGAAAGGGCATGTCTGATGTGA | 4710 | 0.4042 | MNYQQRLQVAAKIILEHDACDADAPLNVQELGIKATLKPHQVEGVSWLIRRYKLGVNVLLGDEMGLGKTLQAISLLSYLKECQLSVGPSLVLCPLSVTDGWVSEIVKFSPQLKVIKYVGGKEDRCCLRRNIHEHVQGQSTAVNVLLPFDVLLTTYDIALIDQDFLSQIPWQYAIIDEAQRLKNPSSVLYNVLKESYVMPRRLLMTGTPIQNNLSELWALMYFCMPSIFGTLEQFLSTFKDISDPTSVQNAMKVKEQLKILKSILGAFMLRRTKSKLIESGTLMLPSLTEITVMAPLVGLQKKVYMSILRKELPKLLALSSGTSNHQSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLLILDQLLQKLHYSGHRVLLFAQMTQTLDILQDFLELRKYSYVRLDGSIRAEERFAAIRSFSGPSANSVLNSEADQNGAFVFLITTRAGGVGLNLVAADSVVFYEQDWNPQVDKQALQRAHRIGQMNHVLCINLVTEKTAEEVIMRRAEKKLQLSLNVIGDNIQEHEDEQKSGVGTGDLKSVMFGLHMFDPTENNDGELGDLDLSEINAMTDKVIAMRDVHASDKDDRKFEINPGNLLESYDAKEGASTSFNSDPSLDEASYLSWVKKFEELSKLSGDSIMEMRNRGILDEEKRLKLEAAKKKAEEKKLSKWEALGYHSLNVNDPIIPPDGGNPSDAGSVHFVYGDCTDPLNVCPSEPAIIFSCVDASGNWGRGGMFNALNKLSLSIGDAYERASAHGDLHLGDLHLIKLEDDCDEQNMDTTTPIWVALAVVQSYNPRRKVPRSSISLPHLESCLSKAAFSAKQNSASIHMPRIGYQDGSDRSEWYAIERLLRKYASIYGTSIYILLSSTISVKLMIDSSIKEDSCWESCSASNNVYILLTFLSETTSEDDEMDKDDKPKSSARSKTAKVMARLINYKPWSNELASSLSSLCPTLSKTMVLQTLRLISNSSKAFQFFKWVHDMGFPHNDRSYFIMIEILGRGRNLNVARNFLFSIELRSNGAVKLNDQFFNGLIRSYGQAGLFEESTKLFQTMKTMGVSPSEITFNSLFSILLRRGRTNMANDLYDEILRTYGVAPDTYTYNILIRGFCKNSMVDQGFRFFNEMSRFNCDPDIVTYNTLVDGLCKAGKVKIAHNLVKGMSKKSNDLNPNVVTYTTLIRGYCMKQELDEALLIIKEMTTQGLKLNKITYNTLIKGLCEARKLDKIKDILEQTIGDGQFSPDTCTFNTLIHAHSSAGNLDEALKVFEGMKNLQVPADSATYSVLLWSLCAREDYDMAEKMFDELYEKEILLSNFGSKPLTASYNPMFQYLCEHGKTKKAERVFRQLMKRGTQDPPSYKTMVMGHCKEGSYEDGYELLKWMLRQNFLPDVEIYDSLIHGFLQKEKPLLAKEALEKMLRSSYLPETFTWHSILAKLLEKVCAHESASFIVMMLDKNIRQNIKSSTMSLRLLFGHGLKYRAFEVLELLYRHGYCVKIDELVQFLIHRGKLSEACKMLAFCFENHENVDLDLCNVVILGFVKGTRFQKLLVYAIEAKSVAYVIAERACLM | 1569 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele37g0831 | 1569 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1209 | 1243 | IPR002885 | - | |
Lele37g0831 | 1569 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1066 | 1101 | IPR002885 | - | |
Lele37g0831 | 1569 | PANTHER | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1-LIKE | 24 | 613 | IPR031053 | GO:0003678|GO:0006281|GO:0006338 | |
Lele37g0831 | 1569 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 49 | 226 | IPR014001 | - | |
Lele37g0831 | 1569 | SMART | helicmild6 | 394 | 489 | IPR001650 | - | |
Lele37g0831 | 1569 | Pfam | PPR repeat | 1035 | 1063 | IPR002885 | - | |
Lele37g0831 | 1569 | Pfam | PPR repeat | 1325 | 1353 | IPR002885 | - | |
Lele37g0831 | 1569 | Pfam | PPR repeat | 1359 | 1386 | IPR002885 | - | |
Lele37g0831 | 1569 | Pfam | PPR repeat | 1394 | 1421 | IPR002885 | - | |
Lele37g0831 | 1569 | Pfam | PPR repeat | 1068 | 1094 | IPR002885 | - | |
Lele37g0831 | 1569 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1137 | 1171 | IPR002885 | - | |
Lele37g0831 | 1569 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1102 | 1136 | IPR002885 | - | |
Lele37g0831 | 1569 | FunFam | Putative helicase CHR10 | 282 | 593 | - | - | |
Lele37g0831 | 1569 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 169 | 536 | IPR027417 | - | |
Lele37g0831 | 1569 | SUPERFAMILY | Macro domain-like | 705 | 870 | IPR043472 | - | |
Lele37g0831 | 1569 | CDD | Macro_Poa1p-like_SNF2 | 704 | 864 | - | - | |
Lele37g0831 | 1569 | CDD | SF2_C_SNF | 357 | 500 | - | - | |
Lele37g0831 | 1569 | Pfam | SNF2-related domain | 55 | 344 | IPR000330 | GO:0005524|GO:0140658 | |
Lele37g0831 | 1569 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1245 | 1279 | IPR002885 | - | |
Lele37g0831 | 1569 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 368 | 539 | IPR001650 | - | |
Lele37g0831 | 1569 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1356 | 1390 | IPR002885 | - | |
Lele37g0831 | 1569 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1174 | 1208 | IPR002885 | - | |
Lele37g0831 | 1569 | Gene3D | Tetratricopeptide repeat domain | 1313 | 1449 | IPR011990 | GO:0005515 | |
Lele37g0831 | 1569 | Gene3D | Tetratricopeptide repeat domain | 1093 | 1164 | IPR011990 | GO:0005515 | |
Lele37g0831 | 1569 | Gene3D | Tetratricopeptide repeat domain | 930 | 1092 | IPR011990 | GO:0005515 | |
Lele37g0831 | 1569 | Gene3D | Tetratricopeptide repeat domain | 1165 | 1237 | IPR011990 | GO:0005515 | |
Lele37g0831 | 1569 | Gene3D | Tetratricopeptide repeat domain | 1238 | 1312 | IPR011990 | GO:0005515 | |
Lele37g0831 | 1569 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 25 | 271 | IPR027417 | - | |
Lele37g0831 | 1569 | Gene3D | - | 15 | 283 | IPR038718 | - | |
Lele37g0831 | 1569 | TIGRFAM | PPR: pentatricopeptide repeat domain | 1359 | 1392 | IPR002885 | - | |
Lele37g0831 | 1569 | TIGRFAM | PPR: pentatricopeptide repeat domain | 1176 | 1209 | IPR002885 | - | |
Lele37g0831 | 1569 | TIGRFAM | PPR: pentatricopeptide repeat domain | 1139 | 1167 | IPR002885 | - | |
Lele37g0831 | 1569 | TIGRFAM | PPR: pentatricopeptide repeat domain | 1035 | 1067 | IPR002885 | - | |
Lele37g0831 | 1569 | TIGRFAM | PPR: pentatricopeptide repeat domain | 1211 | 1235 | IPR002885 | - | |
Lele37g0831 | 1569 | TIGRFAM | PPR: pentatricopeptide repeat domain | 1068 | 1103 | IPR002885 | - | |
Lele37g0831 | 1569 | TIGRFAM | PPR: pentatricopeptide repeat domain | 1247 | 1275 | IPR002885 | - | |
Lele37g0831 | 1569 | TIGRFAM | PPR: pentatricopeptide repeat domain | 1325 | 1353 | IPR002885 | - | |
Lele37g0831 | 1569 | TIGRFAM | PPR: pentatricopeptide repeat domain | 1104 | 1138 | IPR002885 | - | |
Lele37g0831 | 1569 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1391 | 1425 | IPR002885 | - | |
Lele37g0831 | 1569 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1280 | 1314 | IPR002885 | - | |
Lele37g0831 | 1569 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1031 | 1065 | IPR002885 | - | |
Lele37g0831 | 1569 | Gene3D | - | 284 | 589 | IPR027417 | - | |
Lele37g0831 | 1569 | Pfam | Helicase conserved C-terminal domain | 365 | 489 | IPR001650 | - | |
Lele37g0831 | 1569 | SUPERFAMILY | HCP-like | 1244 | 1420 | - | - | |
Lele37g0831 | 1569 | Gene3D | Leucine Aminopeptidase, subunit E, domain 1 | 701 | 871 | IPR043472 | - | |
Lele37g0831 | 1569 | SMART | ultradead3 | 33 | 234 | IPR014001 | - | |
Lele37g0831 | 1569 | Pfam | PPR repeat family | 1173 | 1221 | IPR002885 | - | |
Lele37g0831 | 1569 | Pfam | PPR repeat family | 1244 | 1292 | IPR002885 | - | |
Lele37g0831 | 1569 | Pfam | PPR repeat family | 1101 | 1150 | IPR002885 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele37g0831 | Lele-ChrLele37 | 17988918 | 18009221 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele37g0831 | 1231 | 1514 | Glycosyltransferase | AT1G05670 | 24.092 | 2.33e-14 | 76.6 |