Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0828 ATGTTGGGATACGAATGGGGGAATCCTCCGTCGACGATAGTGCTCGCCGGAAGTGAAGAAGCTGCGGTTACTACCGGTGCAGAGTCTGACCAGACCTGCCGCCAAATCTTTGACCACTATACTTCTCATTCGTTATTGCCGGAGCAGCTTCTTCATCAGCAACACCACCACCACCACCAGCCGGCAGGGCCCACTCAACACACCACCGCTAGCTCCACCGCTGATTTTTCTCACTACCACTTCAACCCTCAACCCCACCACCACAACATTCAGCACTCTTTCTTTGACCCACGCGCCTTCCCCGGCGCGTCCTCTTCTTCGTTCCCTCCACCACAGCCTCCTCTTCCTTCCATGCTCTCTCTTGACCCGCTTCCGGGCGTCAACGCCGGCGCCCACTGTGGGCCTGGTGGGTTTCTGGTCGTTCCCAAGTCCGAGGACGTGGGTCGGTCCACTGACTTCCCAGCGTCGAGAATTGGGCTCAACCTTGGTGGCCGCACATACTTCTCATCGTCGGAGGATGACTTCGTGAGCCGGCTCTACCGCCGGTCTAGGCCAGCCGAAACGGGGTCGATGATGATGGCGGCGGCTTCAAACTCGCCTCGTTGCCAAGCCGAAGGCTGCAATGCCGATCTATCACAGGCGAAGCACTACCACCGTCGTCACAAGGTGTGCGAGTTTCACTCCAAGGCAGCCACCGTCATCTCCGCCGGCTTAACCCAGCGATTCTGCCAACAGTGTAGCAGGTTCCATCTTCTTTCTGAGTTTGACAATGGAAAACGAAGCTGCAGGAAGAGACTTGCAGATCATAATCGTCGCCGAAGAAAAACCCAGCAGCCAAATCCAGAAATCATGAAAACCCAGATCGAGAATTCACGAAATTCCACTTTTGAAAGTGTTACAAGGTCTCCACCGGACTCCGGAGCCCAGGCCATGTCGTCGGTGACGGTGGCGGTGTCTCCACCGGACTATTTCCGCCAAACGGCGTATCAGAATCAGAGGACAAGTCCATCGGCAACATCAAGCTCACTGTTCTTCTCAAGCGGGTAG 1047 0.5606 MLGYEWGNPPSTIVLAGSEEAAVTTGAESDQTCRQIFDHYTSHSLLPEQLLHQQHHHHHQPAGPTQHTTASSTADFSHYHFNPQPHHHNIQHSFFDPRAFPGASSSSFPPPQPPLPSMLSLDPLPGVNAGAHCGPGGFLVVPKSEDVGRSTDFPASRIGLNLGGRTYFSSSEDDFVSRLYRRSRPAETGSMMMAAASNSPRCQAEGCNADLSQAKHYHRRHKVCEFHSKAATVISAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQPNPEIMKTQIENSRNSTFESVTRSPPDSGAQAMSSVTVAVSPPDYFRQTAYQNQRTSPSATSSSLFFSSG 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0828 348 ProSiteProfiles Zinc finger SBP-type profile. 199 276 IPR004333 GO:0003677
Lele37g0828 348 MobiDBLite consensus disorder prediction 266 348 - -
Lele37g0828 348 FunFam Squamosa promoter-binding-like protein 14 193 263 - -
Lele37g0828 348 SUPERFAMILY SBT domain 200 278 IPR036893 GO:0003677|GO:0005634
Lele37g0828 348 Gene3D - 193 263 IPR036893 GO:0003677|GO:0005634
Lele37g0828 348 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 58 330 IPR044817 GO:0003677
Lele37g0828 348 MobiDBLite consensus disorder prediction 280 348 - -
Lele37g0828 348 MobiDBLite consensus disorder prediction 63 89 - -
Lele37g0828 348 SUPERFAMILY beta-sandwich domain of Sec23/24 47 343 - -
Lele37g0828 348 MobiDBLite consensus disorder prediction 52 117 - -
Lele37g0828 348 Pfam SBP domain 202 275 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0828 Lele-ChrLele37 17965483 17967839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0828 1 249 SBP-box Gene Family AT1G02065 46.693 1.23e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele37g0828 SBP 9.3e-31 No_clan