Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0821 ATGCTTGCCACGACTGCGTTTTCGTCCGTCTATGCCTTCGGGTTCGCCACCATAAGACCATCCGAATCCCGTTCAACCATTTTTTTTCCGCTGAAGCTCAGAGCATCTCTCCATGACTATCCGCTCGCAAGCAAAATTGTGGTTAAAAATTTGCCATATTCTGCTGGTGAGACTAATCTCGAGAAGGCATTTTCAAATTTTGGCGAGATAGCTGAGGTTAAAGTTGTGAAAGATACCACAAAAAGATCCAAGGGATATGCCTTTATTCAGTACACTTGTCAAGATCATGCAATGCTTGCACTAGAAAGCATGGATCAAAAGGTATTCTATGGGCGGAAAATATATGTAGAAATTGCAAAACCTGGGAAGGATGCTTTTCATGGCCACCCAAAGACCTCAGGGCCCCCAAAGAAGTGGCTTAAGCCAGATCAAGAGGAAGTGGTGGATTGCTGGTACTGA 459 0.4444 MLATTAFSSVYAFGFATIRPSESRSTIFFPLKLRASLHDYPLASKIVVKNLPYSAGETNLEKAFSNFGEIAEVKVVKDTTKRSKGYAFIQYTCQDHAMLALESMDQKVFYGRKIYVEIAKPGKDAFHGHPKTSGPPKKWLKPDQEEVVDCWY 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0821 152 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 39 133 - -
Lele37g0821 152 CDD RRM_SF 46 117 - -
Lele37g0821 152 Gene3D - 35 140 IPR012677 -
Lele37g0821 152 SMART rrm1_1 45 117 IPR000504 GO:0003723
Lele37g0821 152 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 46 114 IPR000504 GO:0003723
Lele37g0821 152 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 44 121 IPR000504 GO:0003723
Lele37g0821 152 SUPERFAMILY RNA-binding domain, RBD 44 126 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0821 Lele-ChrLele37 17826579 17829964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0821 43 124 Eukaryotic Initiation Factors Gene Family AT4G34110 31.707 3.29e-08 49.7